Erwinia amylovora CFBP1430: EAMY_2744
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Entry
EAMY_2744 CDS
T01197
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
eam
Erwinia amylovora CFBP1430
Pathway
eam03030
DNA replication
eam03430
Mismatch repair
eam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EAMY_2744 (dnaE)
03430 Mismatch repair
EAMY_2744 (dnaE)
03440 Homologous recombination
EAMY_2744 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eam03032
]
EAMY_2744 (dnaE)
03400 DNA repair and recombination proteins [BR:
eam03400
]
EAMY_2744 (dnaE)
Enzymes [BR:
eam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EAMY_2744 (dnaE)
DNA replication proteins [BR:
eam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EAMY_2744 (dnaE)
DNA repair and recombination proteins [BR:
eam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EAMY_2744 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
CBA22332
UniProt:
D4HZ66
LinkDB
All DBs
Position
complement(2829152..2832634)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMIDGLAKTSPLVKYAASIGMPAIGITDFTNLCGLVKFYGTAHGQ
GMKPIIGADFNVSSEAMGDELTQITVLAADNEGYQNLTLLISRAYQRGYGPAGPTIDRDW
LAEHQQGLILLSGGRRGDVGKMLLRGNHTQVRECLSFYQQHFPDRYYLELIRTGRPDEEA
YLHAAVELAVAQGVPVVATNEVCFLAESDFDAHEIRVAIHDGFTLDDPKRPRHYSPQQYL
RSEEEMCELFSDIPEALENSVEIARRCNVTIRLGEYFLPQFPTGEMTTEDFLVVESKKGL
EERLEFLFPDEKVRAERRADYDQRLDIELNVINQMGFPGYFLIVMEFIQWSKDNDVPVGP
GRGSGAGSLVAYALKITDLDPLAFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIEHVAE
MYGRQAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTQITDFAPLYCDENGDHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALAMINAKRAKSGEAPIDIAAIPLEDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYSLGGADMLRRAMGKKNPVEM
ARQRGGFEDGAKARGIDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECLRMGLKVLPPDINSGLYQFHVNDEGEIVYGIGAIKG
VGEGPIEAIIEARNEGGYFRELFDLCARTDTKKMNRRMLEKLIMSGAFDRLGPHRAALMS
ALPDALKAADQHAKAEAIGQVDMFGVLAEAPEQVEQSYSDVKPWPEQIQLDGERETLGLY
LTGHPINQYLKEIERYVGGQRLKDMHPTERGKMTTAAGLVVAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKFQHMLEKDRILIVSGQVSFDDFNGGLKMMARDMMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPYRSGTIPVHLYYQREDARAKLRFGATWRVSPSD
RLLNDLRSLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacctcgttttattcatttacgcgtccacagcgactactcgatgatcgatgga
ctggcgaaaacgagtccgttagtgaaatacgcggcaagcataggtatgccggccatcggc
atcacggattttaccaacctgtgcgggctggtgaagttttacggcacggcccacggtcag
ggcatgaagccgattatcggcgccgatttcaacgtcagcagtgaagcaatgggcgatgag
ctgacgcaaatcaccgtattagccgccgataatgagggttatcaaaacctgacgctgctg
atttcacgcgcctaccagcggggctacgggccagcgggaccgaccatcgatcgtgactgg
ctggctgaacaccagcagggcctgatcctgctctccggcggtcgtcgtggcgatgtcggt
aaaatgctgttgcgcggtaaccacacgcaggtccgcgagtgcctgagtttctatcagcaa
cattttcccgatcgctactatcttgagctgatccgcaccgggcggcctgatgaagaagcg
tacctgcacgcggcagtagagctggcggtagcgcagggggttcccgtcgtcgccaccaac
gaagtctgttttcttgccgagtcggactttgatgcccatgagatccgcgtagcgatccat
gacggtttcaccctggacgaccccaagcgcccgcgtcattacagtccgcagcagtatctg
cgcagcgaggaggagatgtgcgagctgttctcagacattcctgaagcgctggaaaacagt
gtggaaatcgcccgtcgctgtaacgtcaccatccgtcttggcgaatatttcctgccacag
ttcccgaccggagagatgaccacggaagatttccttgtggtcgaatcgaaaaagggcctc
gaagagcgtctggaattcctgttcccggatgaaaaggtgcgtgccgaacgccgtgctgat
tatgaccaacgtctggatatcgagctgaacgttatcaatcagatgggcttccccggctac
ttcctgatcgtgatggagttcatccagtggtccaaggataacgatgttccggtcgggccg
ggtcgtggttcgggggcgggttcgctggtggcctatgcgctgaagatcaccgacctcgat
ccgctggcgtttgacctgctgtttgaacgtttccttaacccggaacgtgtttcgatgccc
gattttgacgtcgacttctgcatggaaaagcgcgacttggtgattgaacacgttgcggag
atgtacggccgtcaggcggtatcacagatcatcaccttcggcaccatggcggcgaaggcg
gttatccgtgacgtcgggcgcgtgctgggccatccttatggctttgttgaccgcatctcc
aagctggtgccgcccgatccaggcatgacgctggaaaaagcctttgctgccgaaccgcag
ctgccggaaatttatgaggccgatgaagaggttaaggcgctgattgatatggcgcgcaag
ctggaaggcgtgacgcgtaatgccggtaaacatgccgggggcgtggtgatcgcgccgacg
caaattaccgattttgcccccctgtactgtgatgaaaacggcgaccacccggtcactcag
tttgataaaaatgatgtggaatatgccgggctggtgaagtttgacttcctcggtctgcgc
acgctaaccattatcgactgggcgctggcaatgattaacgccaaacgggctaagagcgga
gaagcgccgattgatatcgctgcgattccgcttgaagataaaaaaagtttcgatatgctg
caacgctcggagaccacggcggtattccagcttgaatcgcgcggcatgaaggatttgatt
aagcgcctgaagcccgactgcttcgaggatatgatcgcgctggtggccctgttccgtccg
gggccgttacagtccggcatggtggataactttatcgaccgtaagcacgggcgcgaagag
atttcctacccggatattcagtggcagcatgagtcgcttaagccggtgctggagccgacc
tacggcatcatcctgtatcaggaacaggtgatgcagatagcccaggtactggccggttac
agcctgggcggggcggatatgctgcgccgtgcgatgggtaaaaaaaacccggtcgaaatg
gccaggcagcgaggcggcttcgaagacggggcgaaagcgcgcggcatagacggcgaactg
gcgatcaaaattttcgatctggtggagaaattcgccgggtacggctttaacaaatcgcac
tccgccgcctatgcgctggtttcctatcaaacgctgtggctgaaagcgcactaccccgcg
gagtttatggcggcggtgatgacggccgatatggacaacaccgaaaaggtggttggcctg
gtggatgagtgcttacgcatggggctgaaagttctgccgccggacattaattctggcctg
tatcagttccatgtgaatgacgagggcgaaattgtctacggtattggcgcgataaaaggc
gttggcgaagggccgatcgaagcgattatcgaggcgcgtaacgaaggcggttatttccgc
gagttattcgacctctgcgcacgtaccgataccaaaaagatgaaccgccggatgctggaa
aaattgattatgtccggcgcgtttgaccgtttaggtccgcaccgtgctgcattgatgagc
gcgctgccggatgcgttaaaagccgccgaccagcacgctaaggccgaggcgattggccag
gtcgatatgtttggcgtgctggcagaagccccggagcaggtggagcagtcctattccgac
gtcaagccgtggccggaacagattcagctggacggcgaaagggaaactctggggctttat
ctgaccggccacccgatcaaccagtatctgaaagaaattgagcgctatgtcggtggacag
cgcctgaaagacatgcacccgaccgagcgtggtaaaatgaccactgcggccggtctggtg
gtggcggcccgcgtgatggtaacaaaacgcggtaaccgtattggcatctgcacgctggat
gaccgttctggtcgcctggaagtgatgttatttacagatgcgctagacaagttccagcat
atgctggagaaagaccgtattctgatcgtcagtgggcaggtcagcttcgatgacttcaat
ggcgggcttaaaatgatggcccgcgatatgatggacatcgatgaagcacgcgaaaaatat
gcgcgtgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccgt
ctccgtcaatcccttgaaccttatcgttcggggacaattccggtacatctctactatcag
agagaggatgcgcgggcaaagttgcgctttggtgcaacctggcgcgtgtcgccgagcgat
cgtttattgaacgatctgcggtcgttgataggatcggagcaggtggaactggagtttgac
taa
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