Erwinia amylovora ATCC 49946: EAM_1819
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Entry
EAM_1819 CDS
T01199
Symbol
dbpA
Name
(GenBank) ATP-independent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
eay
Erwinia amylovora ATCC 49946
Brite
KEGG Orthology (KO) [BR:
eay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eay03009
]
EAM_1819 (dbpA)
Enzymes [BR:
eay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EAM_1819 (dbpA)
Ribosome biogenesis [BR:
eay03009
]
Prokaryotic type
rRNA helicases
EAM_1819 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
P-loop_SecA
Helicase_RecD
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
CBJ46494
LinkDB
All DBs
Position
complement(1958833..1960212)
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AA seq
459 aa
AA seq
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MTAFSTLTQLPASQIDNLNELGYLAMTPVQAESLPAILAGRDVRAQAKTGSGKTAAFGLG
VMHRVDASQYVTQALVLCPTRELADQVTKELRRLARFTSNIKILTLCGGQPVGAQRDSLL
HAPHIVVGTPGRILDHLQRETLKLDAINTLVLDEADRMLEMGFREDIDAIISHSPQTRQT
LLFSATWPQAIAQISQSIQRNPLTIETGDVSDLPAIEQTFYEAASREKLTALIGLLSERQ
PSSCVVFCNTKRECDDIAYALDKAQISAQPLHGDLEQRERDQMLIRFANGSCRVLVATDV
AARGLDIKALPMVVNYQLSFDPEVHVHRIGRTARAGQEGCAVSFVSPDEMIRAHALEDYL
QQKLVWCNLSALKSVAARPLLAEMVTVSLDGGRKAKIRPGDILGALTGDGGLSGDQVGKI
DIAPTLAYVAIRRELARKVMQQLQQVKIKGKSCRARLLK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgactgctttttctaccttgacccaactgccagccagccagatcgataaccttaatgaa
cttggctaccttgccatgaccccggtgcaggctgaatcgctgcccgccattctggctggc
cgtgacgttcgcgcccaggcaaaaacgggcagcggaaaaactgccgcatttggtttaggt
gtgatgcaccgcgtcgatgccagccagtatgtcacccaggctctggtcctttgccccacg
cgtgaattggccgatcaggtcacgaaagaactacgccgtcttgcgcgttttacgtccaat
atcaaaatcttaaccctgtgcggcggccagcctgtcggtgcgcaacgtgactcgctactc
cacgcgccgcacatcgtggtagggacgccgggacgtattctcgatcatttgcaacgagaa
acgctgaagctggacgccatcaacaccctggtgctggatgaggccgaccgcatgctggag
atgggtttccgcgaagatattgacgcgataatcagccacagcccgcagacgcgtcagacg
ctgctgttttccgctacctggccgcaggcgatcgcgcaaatcagtcagagcattcagcgc
aacccgttgacgattgaaaccggggacgtttctgacctgccagcgattgagcagactttc
tatgaagcagcatcgcgtgaaaaactgactgcgcttattggcttgctcagcgaacgtcag
ccttcttcctgtgtggtgttttgcaataccaaacgtgaatgtgatgacatcgcctacgcg
ctggacaaagcgcagattagcgcacagccgctgcatggcgatcttgagcaacgcgagcgc
gatcaaatgctgatacgcttcgccaacggcagttgtcgggtactggttgccacggacgtg
gcggcacgcgggttggatattaaagctttgccgatggtggtcaattatcagttgtccttc
gatcctgaagtgcatgtacaccgtataggcagaactgctcgcgcagggcaggagggctgt
gcggtgagttttgtctctccggatgaaatgatacgtgcgcatgcactggaagattatttg
cagcaaaaactggtgtggtgcaacctgtctgcactgaaatcagtggctgcaaggccactg
ctggcagaaatggtgacggtaagcctggacggtgggcgtaaggctaaaatccggccggga
gatattctgggtgcattgacaggtgacggtggactcagcggcgatcaggtcggcaagatt
gatatcgctcccactctggcttatgtggctatccgccgtgagctggcgcgcaaggttatg
cagcagttacagcaggtgaagattaaaggtaagtcctgccgggcacgcctgctgaaatag
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