KEGG   Escherichia coli BL21(DE3): ECD_03273
Entry
ECD_03273         CDS       T00931                                 
Symbol
rtcR
Name
(GenBank) sigma 54-dependent transcriptional regulator of rtcBA expression
  KO
K14414  transcriptional regulatory protein RtcR
Organism
ebl  Escherichia coli BL21(DE3)
Brite
KEGG Orthology (KO) [BR:ebl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ebl03000]
    ECD_03273 (rtcR)
Transcription factors [BR:ebl03000]
 Prokaryotic type
  Other transcription factors
   Others
    ECD_03273 (rtcR)
SSDB
Motif
Pfam: RtcR Sigma54_activat Sigma54_activ_2 AAA_5 AAA Mg_chelatase NACHT AAA_16 AAA_22 AAA_30 AAA_7 AAA_19 AAA_2 AAA_14 AAA_33 T2SSE ATPase_2 ResIII TsaE MCM NB-ARC
Other DBs
NCBI-ProteinID: ACT45076
LinkDB
Position
3418564..3420162
AA seq 532 aa
MRKTVAFGFVGTVLDYAGRGSQRWSKWLPTLCLCQQESLVIDRLELLHDARSRSLFETLK
RDIASVSPETEVVSVEIELHNPWDFEEVYACLHDFARGYEFQPEKEDYLIHITTGTHVAQ
ICWFLLAEARYLPARLIQSSPPRKKEQPRGAGEVTIIDLDLSRYNAIASRFAEERQQTLD
FLKSGIATRNPHFNRMIEQIEKVAIKSRAPILLNGPTGAGKSFLARRIFELKQARHQFSG
AFVEVNCATLRGDTAMSTLFGHVKGAFTGARESREGLLRSANGGMLFLDEIGELGADEQA
MLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDLRQLVAEGKFREDLYARINLWTFTLPG
LRQRQEDIEPNLDYEVERHASLTGDSVRFNTEARRAWLAFATSPQATWRGNFRELSASVT
RMATFATSGRITLDVVEDEINRLRYNWQESRPSALTQLLGAEAENIDLFDRMQLEHVIAI
CRQAKSLSAAGRQLFDVSRQGKASVNDADRLRKYLARFGLTWEALQDQHSSS
NT seq 1599 nt   +upstreamnt  +downstreamnt
atgcgtaaaacagtggcttttggctttgtcggtaccgtgctggattatgccgggcgcggc
agtcagcgctggtcgaaatggcttccgacactctgtttatgccagcaagaatcgttggtc
atcgatcgactggaattattgcatgacgcccgctcgcgctcgctatttgaaacgcttaaa
cgcgatatcgccagcgtttcgccagaaacagaagtggtgagcgttgagattgaactgcat
aacccgtgggatttcgaagaggtttacgcttgcctgcatgatttcgcccgtggttacgag
tttcagccagaaaaagaagactatttaattcacattaccaccggcacccacgtcgcgcag
atttgctggtttctgctggcggaagcgcgttacctgcccgcccggctgatacaatcttca
cctccgcgcaaaaaagaacagccgcgcggcgcaggtgaagtgacgattatcgatctcgat
ttaagccgttataacgccatcgccagccgctttgccgaggaacgccagcaaacgcttgat
tttcttaagtccggcattgccacgcgtaacccccacttcaaccgcatgattgagcagatc
gaaaaagtggcgatcaaatcccgcgcgccgattctgcttaacggtccaaccggcgcgggc
aagtcatttctggcgcgacgcatcttcgagttaaaacaggcgcggcatcagtttagcggc
gcgtttgtggaagtgaactgcgccaccctgcgcggcgataccgccatgtcgacgctgttt
ggtcatgtaaaaggcgcgtttaccggggcgcgggaatctcgtgaaggtttattacgcagc
gccaacggcggaatgttgtttcttgatgagattggcgaactgggcgcagacgaacaagca
atgctgctaaaagccattgaagagaaaaccttttacccgtttggcagcgatcgccaggtg
agcagtgattttcagcttatcgccggaacggtgcgcgatttgcgccagctggttgccgaa
ggcaaattccgcgaagatctgtacgcgcggatcaatctctggaccttcaccctgccgggg
ctacgccagcgccaggaagatattgaacctaacctggattatgaagtggagcgccacgcc
tcactcaccggcgacagcgtgcgttttaacaccgaagcgcggcgtgcctggctggccttt
gcaacatctcctcaggcgacatggcgcggtaactttcgcgagctttctgccagcgtcacg
cggatggcaacctttgccactagcggacgcatcactctggacgtggttgaagatgagata
aaccgtctgcgctataactggcaggagagccgtccctccgcgcttacgcaactgctgggc
gcagaggcagaaaacatcgatctcttcgaccgtatgcaactggaacacgttatcgctatc
tgccgccaggcaaagtcgctttctgctgccggacgacagctttttgatgtttcgcgccag
ggcaaagccagcgtcaatgacgcggatcggctacgcaaatacctggcgcgttttggtctg
acctgggaagcattgcaggatcagcacagctccagttga

DBGET integrated database retrieval system