Equus caballus (horse): 100060510
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Entry
100060510 CDS
T01058
Symbol
CUX1
Name
(RefSeq) LOW QUALITY PROTEIN: protein CASP
KO
K09313
homeobox protein cut-like
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecb03000
]
100060510 (CUX1)
Transcription factors [BR:
ecb03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
100060510 (CUX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
ATG17_like
Motif
Other DBs
NCBI-GeneID:
100060510
NCBI-ProteinID:
XP_023511155
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All DBs
Position
13:9965940..10305277
Genome browser
AA seq
1622 aa
AA seq
DB search
MERAAGRFRNAFSDRVLESKAPGTPLDGGVPGRGPRAEPRAPPGDPAGAPRRGPEPPPPP
RPGGASPPATPHPEERRALGVLPEPASSALAAPGQPLDSARWMLCVAGAKLKRELDATAT
VLANRQDESEQSRKRLIEQSREFKKNTPEDLRKQVAPLLKSFQGEIDALSKRSKEAEAAF
LNVYKRLIDVPDPVPALELGQQLQVKVQRLHDIETENQKLRETLEEYNKEFAEVKNQEVT
IKALKEKIREYEQTLKNQAETIALEKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKVQ
TLQTALEKTRTELFDLKTKYDEEITAKADEMEMIMTDLERANQRAEVAQREAETLREQLS
SANHSLQLASQIQKAPDVEQAIEVLTRSSLEVELAAKEREIAQLVEDVQRLQASLSKLRE
NSASQISQLEQQLSAKNSTLKQLEEKLKGQADYEEVKKELNILKSMEFAPSEGAGTQDAS
KPLEVLLLEKNRSLQSENAALRISNSDLSGSARRKGKDQPESRRPGPLPASPPPQLPRNT
GEQASNTNGTHQFSPAGLTQDFFSSSLASPSLPLASTGKFALNSLLQRQLMQSFYSKAVQ
EAGSTSMIFPTGPYSTNSISSQSPLQQSPDVNGMAPSPSQSESAGSVSEGEEIDTAEIAR
QVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQ
NILALRSIQGRQRENPGQSLHRLFQEVPKRRNGSEGNITTRVRASETGSDEAIKSILEQA
KRELQVQKAAEPAQPSSSSSSGSSDDAIRSILQQARREMEAQQAALDPALKQTPLSQTDI
AILTPKLISTSPISSGYSPLAISLKKPPAAPDSSASALPNPPALKKEAQDTPGLDLQGAA
DPAQGVLRHVKNELGRSGVWKDHWWSTVQPERKSAVPPEEPKGEEASGGKEKGGGSQTRA
ERGQLQGPSSSEYWKEWPSAESPYSQSSELSLTGASRSETPQNSPLPSSPIVPLSKPAKP
SVPPLTPEQYEIYMYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRP
KPWSKLTQKGREPFIRMQLWLNGELGQGVLPVQGQQQGPVLHSVTSLQDPLQQGCVSSES
TPKTSASCSPAPESPMSSSESVKSLTELVQQPCPPIETSKDGKPPEPSDPPASDSQPTTP
LPLSGHSALSIQELVAMSPELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLL
ARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPCEP
PSVGIDYSQGASPQPQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKT
STVINWFHNYRSRIRRELFIEEIQAGSQGQAGASDSPSARSGRAAPGSEGDSCDGVEAAE
GPGAADAEESGGPAAAAKSQGGPAEAAAAPEEQEEAPRPAEKAQPPPSGXPAAADDADGE
GRARAPPPPPPEGPADGPGPVPNPAAAPAAGEDAATSAAPPAEGPCRARDGADRSSALPS
TSAPAAARRASSLQSLFGLPEAAGARDSRDNPLRKKKAANLNSIIHRLEKAASREEPIEW
EF
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgcggcgggtcggttccgaaatgccttctccgatcgggttcttgaaagcaaa
gccccggggaccccgctggacggcggcgtgccgggccgtggtccacgcgccgagccccgg
gcgccgccgggggatcctgccggggctccccgtcgggggcccgagccgccgccgccgccg
cgcccagggggtgcgtccccgcctgccaccccccacccagaggagcggcgcgccctcggg
gtcctcccggaacctgccagctccgcgctcgcggcgcctggacagcccctggactctgcc
aggtggatgctgtgtgtagccggagccaagttgaagagggaactcgatgccaccgcaaca
gtattggcaaaccggcaagatgaaagcgagcagtctagaaagcggctcatcgagcagagc
cgagagttcaagaagaacactccagaggatttgcgcaagcaggtagcgccactgctgaag
agcttccaaggggagattgatgcactgagtaaaagaagcaaagaagccgaggcagccttc
ttgaatgtctacaagagactgattgacgttccagatcccgtgccggctctggagctgggg
cagcagctccaggtcaaagtgcagcggctgcacgacattgaaacagagaaccagaaactt
agggaaactcttgaagaatacaacaaggaatttgccgaagtgaagaatcaagaggttacg
ataaaagcacttaaagagaaaatccgagaatatgaacagactctgaagaaccaagctgag
accatagctcttgagaaggaacaaaagttacaaaatgattttgcagaaaaggagagaaag
ctgcaagagacccagatgtctaccacctcaaagctggaggaggcggaacataaggttcag
actctgcaaacagccctggaaaaaactcgaacagaattatttgacctgaaaaccaaatat
gatgaagaaattactgccaaggccgacgaaatggaaatgatcatgacggaccttgaaaga
gcaaaccagagggcagaggtggctcagagagaggcggagaccttaagggagcagctctcg
tcagcaaaccactctctccagctggcctcgcagatccagaaggcgccggacgtggagcag
gccatagaggtgctgacccgctccagcctggaagttgagttggccgccaaagagcgggag
attgcccagctggtggaggacgtgcagcgactccaggccagcctctccaagctgcgcgag
aactcggccagccagatctcccagctcgagcagcagctgagtgccaagaacagcaccctc
aaacaactggaagaaaaactcaaaggacaggctgactatgaggaggtgaagaaagaactc
aacattctgaaatccatggagttcgcaccgtccgagggagctggcacacaggatgcatcc
aagcccctggaggtgctgctgctggagaagaaccgctcgctgcagtccgagaacgccgcg
ctgcgcatctccaacagcgacctgagcgggtcagccaggagaaaagggaaagaccagcct
gagagtcggcgtcctggacctttgccggcctcccctcctcctcagttgccccgcaacacg
ggggagcaggcttccaatactaatggtacacaccagttctcaccagcggggttaactcaa
gactttttcagctcatccctggcaagccccagcctacccctggcttctacgggaaaattt
gcactaaactccctcctccaacgacagctaatgcagtccttctactccaaggccgtgcag
gaagcaggaagcacaagcatgatttttccaacaggtccatacagcacaaactccatatct
tcccaaagtccattacagcaaagcccagatgtaaatggcatggccccgtctcccagccag
tcagaaagtgctgggagcgtctccgagggcgaggagatagacactgcagaaatcgcccgg
caggtgaaagagcaattgatcaagcacaatatcggacagcgcattttcggacattatgtc
ttgggactgtcgcaagggtccgtgagcgagattctggcccggcccaagccatggaacaaa
ctgactgttcgcggcaaggagccctttcacaagatgaagcagttcctgtcagacgagcag
aatatcttggccctccgcagcatccaaggcagacagagagagaatccaggccagagcctg
cacagactatttcaggaagtaccgaaacgaagaaatgggtctgaaggtaacatcaccacc
cgggtccgagcctcagagaccgggtccgacgaagcaatcaagtccatcctggaacaagcc
aaacgggagctgcaggtgcagaaagccgcggagccggcccagccttcatcatcgtccagc
agcgggagctccgacgacgccatccgctccatcctgcagcaagcccgccgagaaatggag
gcccagcaggctgctctcgaccccgccttaaaacaaacgccgctgtcccagaccgacatt
gccatcctgacccccaagttaatctccacctcgcccatatcgtccggttactctccgcta
gccatctccctgaagaagccccccgcagcccccgattccagcgcctctgctctgcccaac
cccccggccctcaaaaaggaggcccaggacacgcccgggctggacctccagggagcggcc
gacccggcacagggggtcctgagacacgtgaagaatgagctgggccgcagcggcgtgtgg
aaggaccactggtggagcaccgtgcagccggagagaaagagcgcggttcctcccgaagaa
cccaagggcgaggaagccagtggtgggaaagagaagggcggcggcagccagacacgcgcc
gagcgcggccagctgcagggaccctcgtcatccgagtactggaaagagtggcccagcgcc
gagtcgccgtactcccagagctccgagctgagcctgaccggagccagccgcagcgagacg
ccccagaacagccctctgccctcctccccgatcgtgcccctgtccaagcccgccaagccc
tcggtccctccactgacccccgagcagtacgagatctacatgtaccaggaggtggacacc
atcgagctcacccggcaggtgaaggagaagctggccaagaatggcatttgtcagaggatc
tttggggagaaggtgctgggcctgtcccagggcagcgtcagcgacatgctgtcccggccg
aagccgtggagcaagctgacccagaaaggccgcgaacccttcatccggatgcagctctgg
ctgaacggcgagctgggccagggcgtcctgcccgtgcaagggcagcagcaagggccagtc
ctccattctgtgacgtcactacaggaccccctgcagcagggctgcgtgagctcagaaagc
actccaaagacctctgccagctgcagccctgcacccgaatctccaatgagctctagcgaa
tcggtgaagagcttgactgaactggtccagcagccctgtccccccatcgaaaccagtaag
gatggcaaaccaccagaacccagcgacccgcccgcctcagactcccagcccaccacccca
ctgccgctgtctggacactcggccctcagcatccaagagctggtagccatgtctccagag
ctggacacctacggcataaccaagagggtcaaggaggtgctgaccgacaacaacctcggt
cagcgcttatttggagagaccatcttagggctcactcaaggctccgtctctgatctcctc
gctcgcccgaaaccctggcacaagctcagtctgaagggacgggagcccttcgtccggatg
cagctgtggctgaatgaccccaacaacgtggagaagctgatggacatgaaacggatggag
aagaaagcatacatgaagcggcggcacagctcagtcagcgacagccagccctgtgagccc
ccctccgttggcattgactacagccagggcgccagcccccagccccagcaccagctgaag
aaaccccgagtggtgctggctcctgaagagaaagaagctctgaagagagcatatcagcaa
aagccatacccgtcaccaaaaaccatcgaagaactcgccacccagctcaacttgaaaacc
agcactgtcatcaactggttccacaattacaggtctcggatccgcagagaactgttcatc
gaggagatccaggccggcagccagggccaggccggcgccagcgactccccgtcggcccgg
agcggccgcgcggcgcccggctcggagggcgacagctgcgacggcgtggaggccgccgag
ggcccgggcgccgcggacgccgaggagtcgggcggccccgcggccgccgccaagtctcag
ggagggccggccgaggcggccgcggccccggaggagcaggaggaggcgccgcggccggcg
gagaaggcgcagccgccgccctcggggnccccggccgccgcggacgacgccgacggcgag
ggccgggcccgggcgccaccgccgccaccgcccgagggccccgcggacggcccggggccc
gtgccaaaccccgccgccgcgcccgcggccggggaggacgccgctacctcagccgcgccg
ccggcggagggcccgtgccgggcccgggacggcgccgacaggagttccgctttgccaagc
accagcgcgcccgcggccgcccgcagggccagctcgctgcagagcctcttcggcctcccg
gaggcggcgggcgccagggactcgcgagacaaccccttgaggaagaagaaggctgcgaac
ttgaacagcataatccaccgcctggagaaggccgccagccgtgaggagcccatcgaatgg
gagttctga
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integrated database retrieval system
