Equus caballus (horse): 100061673
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Entry
100061673 CDS
T01058
Symbol
PTBP1
Name
(RefSeq) polypyrimidine tract-binding protein 1 isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100061673 (PTBP1)
03041 Spliceosome [BR:
ecb03041
]
100061673 (PTBP1)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
100061673 (PTBP1)
Spliceosome [BR:
ecb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100061673 (PTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Nup35_RRM
Motif
Other DBs
NCBI-GeneID:
100061673
NCBI-ProteinID:
XP_014596701
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All DBs
Position
7:322173..344902
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AA seq
721 aa
AA seq
DB search
MLERSHWAGRRWTHSRLVLSPQGQRPRLREAGPQAPPAGFSGRESNVVTHRGAARTCPGF
PLSLLRAQLSTDAHAPCGLTRTQPGHRAGPNPVLQAPSTRGKNPGHGGNKTRARGAEGDQ
PRRPRSQRSEKRNEAQQQDPHQATPHAPLAPPGTGGQYRFQTSQTMASIVPDIAVGTKRG
SDELFSACVTNGPFIMSSGSASAANGNDSKKFKGDSRSAGVPSRVIHIRKLPNDVTEGEV
ISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKE
LKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLRIIVENLFYPV
TLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYAEPVSAQHAKLSLDGQNIYNACCTLRI
DFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGAPGIMSASPYAGAGFPP
TFAIPQAAGLSVPNVHGALAPLAIPSAAAAAAAGRIALPGLAGAGNSVLLVSNLNPERVT
PQSLFILFGVYGDVQRVKILFNKKENALVQMADGSQAQLAMSHLNGHKLHGKPVRITLSK
HQNVQLPREGQEDQGLTKDYGSSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISEDDL
KILFSSNGGIVKGFKFFQKDRKMALIQMGSVEEAIQALIDLHNHDLGENHHLRVSFSKST
I
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgctggaaaggagccactgggccggccgcaggtggactcacagccgcctggtcctctct
cctcagggacagcggccccgactcagggaagcggggccccaagcacccccggcaggtttt
tccggccgtgagtccaacgtggtaactcaccgcggggctgcccgaacttgcccaggtttc
ccgctctccctcctgcgcgcccagctctccaccgatgcgcacgcgccctgcggtctgacg
cgcacccagcccggccacagggcgggtcccaaccccgtgctccaggctccgtccacacgg
gggaagaatcctggtcacggtgggaacaagacacgcgcacgcggagcagaaggggaccaa
ccgcgcagaccgagaagtcagagatccgagaagaggaacgaggcccagcagcaggacccg
caccaggccaccccgcacgcccccctcgctcctccggggacagggggacagtatcgcttt
caaacttctcagacaatggcaagcatcgtcccagacatagcagttggtacaaagcgggga
tccgacgagctcttctctgcctgcgtcaccaacggaccctttatcatgagcagcggctcg
gcctccgcagccaacgggaatgacagcaagaagttcaagggcgacagcaggagcgcaggc
gtgccctcccgcgtcatccacatccgcaagctgcccaatgacgtcaccgagggcgaggtc
atctctctggggctgcccttcgggaaggttaccaacctcctgatgctgaaagggaagaac
caggccttcatcgagatgaacacggaggaggccgccaacaccatggtgaactactacacg
tcagtgacgcccgtgctgcgcggccagcccatctacatccagttctccaaccacaaggag
ctcaagaccgacagctcgcccaaccaggcgcgcgcccaggcagccctgcaggccgtgaac
tcggtccagtcaggaaatctggccctggccgcctcggccgccgcggtggacgccgggatg
gcgatggccggccagagcccggtgctgaggatcatcgtggagaatctgttctacccggtg
accctggacgtgctccaccagatcttctccaagttcggcacggtgctgaaaatcatcacc
ttcaccaagaacaaccagttccaggcgctgctgcagtacgcggagcccgtgagcgcccag
cacgccaagctgtcgctggacggccagaacatctataacgcctgctgcacgctgcgcatc
gacttctccaagctcaccagcctcaacgtcaagtacaacaacgacaagagccgcgactac
acgcgccccgacctgccctcgggcgacagccagccctcgctggaccagaccatggccgcg
gccttcggtgcgcctggtataatgtcagcctctccgtatgcaggagctggtttccctccc
acctttgccattcctcaagccgcaggcctctctgtccccaacgtgcacggggcgctggcc
cccctggccatcccgtcggcagcggcagcggcagcagcgggcaggatcgccctcccgggc
ctggctggggccgggaactctgtgctgctggtcagcaacctgaaccccgagagagtcaca
ccccaaagcctctttattcttttcggcgtgtacggcgacgtgcagcgggtgaagatcctt
ttcaacaagaaggagaacgcgctggtgcagatggccgacggcagccaggcccagctggcc
atgagccacctcaacgggcacaagctgcacgggaagccggtgcgcatcacgctgtccaag
caccagaacgtgcagctgccccgcgagggccaggaggaccagggcctcaccaaggactac
ggcagctcgccgctgcaccgcttcaagaagccgggctccaagaacttccagaacatcttc
ccgccctccgccaccctgcacctctccaacatcccgccctccatatccgaggacgacctc
aagatcctcttctccagcaacggcgggatcgtcaaggggttcaagttcttccagaaggac
cggaagatggcgctgatccagatgggctccgtggaggaggcgatccaggcgctcatcgac
ctgcacaaccacgacctgggcgagaaccaccacctgcgggtctctttctccaagtccacc
atctag
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