Escherichia coli K-12 DH10B: ECDH10B_3457
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Entry
ECDH10B_3457 CDS
T00666
Symbol
yrdC
Name
(GenBank) predicted ribosome maturation factor
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
ecd
Escherichia coli K-12 DH10B
Brite
KEGG Orthology (KO) [BR:
ecd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecd03009
]
ECDH10B_3457 (yrdC)
03016 Transfer RNA biogenesis [BR:
ecd03016
]
ECDH10B_3457 (yrdC)
Enzymes [BR:
ecd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
ECDH10B_3457 (yrdC)
Ribosome biogenesis [BR:
ecd03009
]
Prokaryotic type
Other maturation factors
ECDH10B_3457 (yrdC)
Transfer RNA biogenesis [BR:
ecd03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
ECDH10B_3457 (yrdC)
Prokaryotic type
ECDH10B_3457 (yrdC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
Motif
Other DBs
NCBI-ProteinID:
ACB04345
UniProt:
B1X6D5
LinkDB
All DBs
Position
complement(3526610..3527182)
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AA seq
190 aa
AA seq
DB search
MNNNLQRDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAVMRLLELKQRPVDKGLIL
IAANYEQLKPYIDDTMLTDVQRETIFSRWPGPVTFVFPAPATTPRWLTGRFDSLAVRVTD
HPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGAAFPVVPGETGGRLNPSEIRD
ALTGELFRQG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
gtgaataataacctgcaaagagacgctatcgcagctgcgatagatgttctcaatgaagaa
cgtgtcatcgcctatccaacggaagccgttttcggtgttgggtgcgatcctgatagcgaa
acagcagtgatgcgactgttggagttaaaacagcgtccggttgataaggggctgatttta
atcgcagcaaattacgagcagcttaaaccctatattgatgacaccatgttgactgacgtg
cagcgtgaaaccattttttcccgctggccaggtcctgtcacctttgtctttcccgcgcct
gcgacaacaccgcgctggttgacgggccgctttgattcgcttgctgtacgagtcaccgac
catccgttggtggttgctttgtgccaggcttatggtaaaccgctggtttctaccagtgcc
aacttgagtggattgccaccttgtcgaacagtagacgaagttcgcgcacaatttggcgcg
gcgttcccggttgtgcctggtgaaacgggggggcgtttaaatccttcagaaatccgcgat
gccctgacgggtgaactgtttcgacaggggtaa
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