Escherichia coli O127 H6 E2348/69 (EPEC): E2348C_3075
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Entry
E2348C_3075 CDS
T00796
Symbol
gcvA
Name
(GenBank) DNA-binding transcriptional dual regulator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
ecg
Escherichia coli O127:H6 E2348/69 (EPEC)
Pathway
ecg02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
E2348C_3075 (gcvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecg03000
]
E2348C_3075 (gcvA)
Transcription factors [BR:
ecg03000
]
Prokaryotic type
Helix-turn-helix
LysR family
E2348C_3075 (gcvA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
MarR_2
Motif
Other DBs
NCBI-ProteinID:
CAS10623
UniProt:
B7UHM4
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All DBs
Position
complement(3173599..3174516)
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AA seq
305 aa
AA seq
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MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSL
LLTEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLLPSFAIHWLVPRLSSFNSAY
PGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKLYAEYLLPVCSPLLLTGEKPL
KTPEDLAKHTLLHDASRRDWQTYTRQLGLNHINVQQGPIFSHSAMVLQAAIHGQGVALAN
NVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWILAKAAAEQEKFR
FRYEQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgattaccaccgctaaatgccttacgagtttttgatgccgcagcacgccat
ttaagtttcactcgcgcagcagaagagctttttgtgacccaggccgcagtaagtcatcaa
atcaagtctcttgaggattttctggggctaaaactgttccgccgccgtaatcgttcactc
ctgctgaccgaggaagggcaaagctatttcctcgatatcaaagagatattttcgcaatta
accgaagcgacgcgtaaactccaggcccgtagcgctaagggggcgttgacggtcagttta
ctccccagtttcgccattcattggttggttccgcgactttccagctttaattcagcttat
ccgggaattgacgttcgaatccaggcggttgatcgtcaggaagataagctggcggatgat
gttgatgtggcgatattttatggtcggggcaactggccggggctacgggtggaaaaactg
tacgctgaatatttattgccggtgtgctcgccgctactgctgactggcgaaaaacccttg
aagaccccggaagatctggctaaacatacgttattacatgatgcgtcacgccgtgactgg
cagacatatacccgacagttggggttaaatcatatcaacgttcagcaagggccaattttt
agccatagcgccatggtgctgcaagcggctatccacgggcagggagtggcgctggcaaat
aacgtgatggcgcaatctgaaatcgaggccggacgtcttgtttgcccgtttaatgatgtt
ctggtcagtaaaaacgctttttatctggtttgtcatgacagccaggcagaactgggtaaa
atagccgcctttcgccaatggatcctggcgaaagccgctgctgaacaagaaaaattccgc
tttcgttatgaacaataa
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