Escherichia coli O18 K1 H7 UTI89 (UPEC): UTI89_C4338
Help
Entry
UTI89_C4338 CDS
T00338
Symbol
rho
Name
(GenBank) transcription termination factor rho
KO
K03628
transcription termination factor Rho
Organism
eci
Escherichia coli O18:K1:H7 UTI89 (UPEC)
Pathway
eci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UTI89_C4338 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eci03021
]
UTI89_C4338 (rho)
03019 Messenger RNA biogenesis [BR:
eci03019
]
UTI89_C4338 (rho)
Transcription machinery [BR:
eci03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
UTI89_C4338 (rho)
Messenger RNA biogenesis [BR:
eci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
UTI89_C4338 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ABE09759
UniProt:
Q1R4F5
LinkDB
All DBs
Position
4226339..4227670
Genome browser
AA seq
443 aa
AA seq
DB search
MDDPAIPFTTLSSRFTPSLRTHTTMNLTELKNTPVSELITLGENMGLENLARMRKQDIIF
AILKQHAKSGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDT
ISGKIRPPKEGERYFALLKVNEVNFDKPENARNKILFENLTPLHANSRLRMERGNGSTED
LTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEV
TEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNT
VVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFK
GTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAM
EFLINKLAMTKTNDDFFEMMKRS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcctgccataccattcacaacattaagttcgagatttaccccaagtttaaga
actcacaccactatgaatcttaccgaattaaagaatacgccggtttctgagctgatcact
ctcggcgaaaatatggggctggaaaacctggctcgtatgcgtaagcaggacattattttt
gccatcctgaagcagcacgcaaagagtggcgaagatatctttggtgatggcgtactggag
atattgcaggatggatttggtttcctccgttccgcagacagctcctacctcgccggtcct
gatgacatctacgtttcccctagccaaatccgccgtttcaacctccgcactggtgatacc
atctctggtaagattcgcccgccgaaagaaggtgaacgctattttgcgctgctgaaagtt
aacgaagttaacttcgacaaacctgaaaacgcccgcaacaaaatcctctttgagaactta
accccgctgcacgcaaactctcgtctgcgtatggaacgtggtaacggttctacggaagat
ttaaccgctcgcgtactggatctggcatcacctatcggtcgtggtcagcgtggtctgatt
gtggcaccgccgaaagccggtaaaaccatgctgctgcagaacattgctcagagcattgct
tacaaccacccggattgtgtgctgatggttctgctgatcgacgaacgtccggaagaagta
accgagatgcagcgtctggtaaaaggtgaagttgttgcttctacctttgacgaacccgca
tctcgccacgttcaggttgcggaaatggtgatcgagaaggcgaaacgcctggttgagcac
aagaaagacgttatcattctgctcgactccatcactcgtctggcgcgcgcttacaacacc
gttgttccggcgtcaggtaaagtgttgaccggtggtgtggacgccaacgccctgcatcgt
ccgaaacgcttcttcggtgcggcgcgtaacgtggaagagggcggcagcctgaccattatc
gcgacggcgcttatcgataccggttctaaaatggacgaagttatctacgaagagtttaaa
ggtacaggcaacatggaactgcacctctctcgtaagatcgctgaaaaacgcgtcttcccg
gctatcgactacaaccgttccggtacccgtaaagaagagctgctcacgactcaggaagaa
ctgcagaaaatgtggatcctgcgcaaaatcattcacccgatgggcgaaatcgatgcaatg
gaattcctcattaataaactggcaatgaccaagaccaatgacgatttcttcgaaatgatg
aaacgctcataa
DBGET
integrated database retrieval system
