Escherichia coli 55989 (EAEC): EC55989_3096
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Entry
EC55989_3096 CDS
T00826
Symbol
recB
Name
(GenBank) exonuclease V (RecBCD complex), beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
eck
Escherichia coli 55989 (EAEC)
Pathway
eck03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EC55989_3096 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eck03400
]
EC55989_3096 (recB)
Enzymes [BR:
eck01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EC55989_3096 (recB)
DNA repair and recombination proteins [BR:
eck03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EC55989_3096 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_25
Cas_Cas2CT1978
BscB_a-b
Motif
Other DBs
NCBI-ProteinID:
CAU99002
UniProt:
B7LEZ3
LinkDB
All DBs
Position
complement(3169611..3173153)
Genome browser
AA seq
1180 aa
AA seq
DB search
MSDVAETLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELL
VVTFTEAATAELRGRIRSNIHELRIACLRETTDNPLYERLLEEIDDKAQAAQWLLLAERQ
MDEAAVFTIHGFCQRMLNLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPREIA
QVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDDETLASRHAQIVARIDTVKQQWRDAV
GELDALIESSGIDRRKFNRSNQAKWIEKISAWAEEETNSYQLPESLEKFSQRFLEDRTKA
GGETPRHPLFEAIDQLLAEPLSIRDLVITRALAEIRETVAREKRRRGEVGFDDMLSRLDS
ALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWHHQPETALLLIGDPKQAIY
AFRGADIFTYMKARSEVHAHYTLDTNWRSAPGMVNSVNKLFSQTDDAFMFREIPFIPVKS
AGKNQALRFVFKGEMQPAMKMWLMEGESCGVGDYQSTMAQVCAAQIRDWLQAGQRGEALL
MNGDDARPVRASDISVLVRSRQEAAQVRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLL
QAVMTPERENTLRSALATSMMGLNALDIETLNNDEHAWDAVVEEFDGYRQIWRKRGVMPM
LRALMSARNIAENLLATAAGERRLTDILHISELLQEAGTQLESEHALVRWLSQHILEPDS
NASSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFITNFRVQDQAFYHDRHSFEAVLDL
NAAPESVDLAEVERLAEDLRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGR
LLQKGEPQDAAGLRTCIEALCDDDIAWQTAQTGDNQPWQVNDALTAELNARTLQRLPGDN
WRVTSYSGLQQRGHGIAQDLMPRLDVDAAGVVSVVEEPTLTPHQFPRGASPGTFLHSLFE
DLDFTQPVDPNWVQEKLELGGFESQWEPVLTEWITAVLQAPLNETGVSLSQLSDRDKQVE
MEFYLPISEPLIASQLDALIRQFDPLSAGCPPLEFMQVRGMLKGFIDLVFRHEGRYYLLD
YKSNWLGEDSSAYTQQAMAAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYDRHFGGVIY
LFLRGVDKEHPQQGIYTTRPNAGLIALMDEMFAGMTLEEA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgtcgccgagacactagatcctttgcgcttgcccttacagggcgagcgcctg
attgaagcctctgccggcacaggcaaaacctttacgattgcggcgctttatttgcgcctg
ttacttggactaggcggttccgccgcctttccccgcccgctgaccgttgaagaactgctg
gtggtcacctttaccgaggctgccacggcagaattgcgcggtcgtatccgtagcaatatc
cacgagttgcgcatcgcctgtctgcgtgaaaccaccgacaatccactgtacgaacgcctg
ctggaagagatcgacgataaagcgcaagccgcgcagtggttgttgttagccgaacggcag
atggatgaagcggcagtctttactattcacggcttttgccagcgcatgctcaacctgaat
gcctttgaatccggcatgctgtttgagcagcagctgattgaagatgagtctctgctacgc
taccaggcctgcgccgatttctggcgtcgccactgctacccgctgccgcgtgaaatagcc
caggtcgtctttgaaacctggaaagggccgcaggcgttgctgcgcgatattaatcgttat
ctgcaaggcgaagcgccggttatcaaagcaccgccgcccgatgatgaaacgctggcttcc
cgccacgcgcaaattgtggcgcgtattgatacggtaaaacagcagtggcgcgacgcagtg
ggtgaactggatgcgctgatcgaatcttctggtattgatcgacgcaagtttaaccgtagt
aatcaggctaaatggatcgaaaagatcagcgcctgggcagaagaagagaccaacagttat
cagttgccagagtcgctggaaaaattctcccagcgtttcttagaagatcgcacgaaagcc
gggggggaaaccccgcgacatccactgtttgaggcgatcgatcaactgcttgcagaacca
ttgtcgatccgcgatctggtgatcacccgcgcattggctgagatccgcgaaacagtagcg
cgtgaaaaacgccgccgtggcgaagtgggttttgatgacatgttaagtcggctcgattcc
gcgctgcgtagcgaaagcggtgaggtgttggcagcggcgatccgtacgcgattcccggtg
gcaatgatcgatgaatttcaggataccgacccccagcagtaccgaatttttcgccgtatc
tggcaccatcagccggaaaccgcattgttgctaattggcgacccgaaacaggccatatat
gcattccggggtgcggatatcttcacttatatgaaggcgcgtagcgaagttcacgcccac
tacactttagacaccaactggcgttccgcaccaggaatggtgaacagcgtgaataagctt
ttcagccagactgatgacgcgttcatgtttcgcgaaataccgtttattccagtgaaatca
gccgggaaaaatcaggcgttacgttttgtctttaaaggtgaaatgcagcctgcgatgaaa
atgtggctgatggaaggcgaaagctgcggagttggcgattatcaaagtaccatggcgcag
gtatgtgctgcgcaaatccgcgactggctacaagccggacagcggggcgaagcgttgctg
atgaacggcgacgacgcgcgtccggtgcgtgcttcggacatcagcgtgctggtgcgcagc
cgccaggaggccgcccaggtgcgcgatgccttaacgttgctggaaatcccttccgtttac
ctttcgaaccgcgacagtgtttttgaaactctggaagcgcaggaaatgctttggttgttg
caggcggtgatgacgcccgaacgtgagaacaccctgcgtagtgcgctggcaacgtcaatg
atggggctgaacgcgctggatattgaaacgctgaataatgacgaacatgcgtgggatgcg
gtagtcgaagagttcgatggttatcggcaaatctggcgcaaacgtggcgttatgccgatg
ctgcgggcgctgatgtcggcgcgtaacattgcagaaaacttgctggcaacggcagccggt
gagcggcgtcttaccgatatcttgcatatcagcgaactgcttcaagaagccggaacgcag
ctggaaagtgaacatgcgctggtacgctggttatcgcaacatatcctcgagccagacagt
aatgcctccagccaacaaatgcgcctcgaaagtgataaacatctggtgcagattgtcacg
atccataaatcgaaagggctggaatatccgctggtctggttgccatttattaccaatttc
cgcgtccaggatcaggcgttttatcacgatcgccactcgtttgaggcagttttggatctt
aatgctgcgccagaaagcgtcgacctcgcggaggtcgaacgtctggcggaagatctgcgt
ttgctttacgtggcgctgacgcgttcggtttggcattgcagtctcggcgttgcaccgctg
gtgcgccgtcgtggcgataaaaaaggtgacaccgacgtccaccaaagtgcgctcgggcgt
ttgctgcaaaaaggggaaccgcaagatgcggcagggcttcgcacctgtattgaagcgtta
tgcgatgatgatattgcctggcaaacggcacaaactggtgataaccagccctggcaggtt
aatgatgctttaactgcagaactgaatgcgaggacactacaacgattgcccggcgataac
tggcgtgtcaccagctactccggcttgcagcagcgtggtcacggtatcgctcaggatctg
atgccacggctggatgttgatgccgcaggcgtggtcagcgtcgttgaagaaccgacgtta
acaccgcatcagttcccgcgcggtgcgtcaccggggacattcttgcacagtttgtttgaa
gacctcgattttacccagccggttgacccgaactgggtacaggaaaaactggaactcggc
ggctttgaatcgcagtgggaaccggtgttgaccgagtggatcacggctgtcctccaggca
cctctcaatgaaacgggtgttagcctgagtcagctttccgaccgcgataaacaggtggag
atggagttttacctgccgattagcgaaccgctcatcgccagccagcttgatgcactaatt
cgccagtttgacccgctatccgctggctgcccgccgctggagttcatgcaggtacgcggc
atgttaaaaggctttatcgacctggtattccgccacgaagggcgttattacctgctcgac
tataaatccaactggctgggtgaagacagttcggcttacacccaacaggctatggcagca
gcgatgcaggcacaccgctatgatctgcaatatcagctttataccctggcgctgcatcgt
tatctgcgccatcgcattgctgattacgactatgatcgtcactttggcggcgttatctat
ctgttcctgcgtggcgttgataaagaacatccgcaacaagggatttacacaacccgaccc
aacgccgggttgattgccctgatggatgagatgtttgccggtatgaccctggaggaggcg
taa
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