Escherichia coli 55989 (EAEC): EC55989_4108
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Entry
EC55989_4108 CDS
T00826
Symbol
rph
Name
(GenBank) ribonuclease PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
eck
Escherichia coli 55989 (EAEC)
Brite
KEGG Orthology (KO) [BR:
eck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eck03016
]
EC55989_4108 (rph)
Enzymes [BR:
eck01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
EC55989_4108 (rph)
Transfer RNA biogenesis [BR:
eck03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EC55989_4108 (rph)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
CAV00651
UniProt:
B7L767
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All DBs
Position
complement(4190856..4191596)
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AA seq
246 aa
AA seq
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MFQAGDFNMRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLK
GQGQGWITAEYGMLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALRAAVDLKALGEFTI
TLDCDVLQADGGTRTASITGACVALADALQKLVENGKLKTNPMKGMVAAVSVGIVNGEAI
CDLEYVEDSAAETDMNVVMTEDGRIIEVQGTAEGEPFTHEELLTLLALARGGIESIVATQ
KAALAN
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
ttgtttcaagccggagatttcaatatgcgtccagcaggccgtagcaataatcaggtgcgt
cccgttaccctgactcgtaactatacaaaacatgcagaaggctcggtgctggtcgaattt
ggcgataccaaagtgttgtgtaccgcctctattgaagaaggcgtgccgcgcttcctgaaa
ggtcagggccagggctggatcaccgcagagtacggcatgctgccacgttctacccacacc
cgtaacgctcgtgaagcggcgaaaggtaagcagggtggacgcacaatggaaatccagcgt
ctgatcgcccgtgctcttcgcgcggcagtagatttgaaagcgctgggtgagttcaccatt
acgctggactgcgacgtgcttcaggctgatggtggcacgcgtaccgcgtcgattacgggt
gcctgcgtggcgctggcagatgcgctacagaagctggtggaaaacggcaagctgaaaacc
aacccgatgaaagggatggtagccgcagtttctgtcggtattgtaaacggtgaagcaatt
tgcgatctggaatacgttgaagactcagccgcagagaccgacatgaacgtagtgatgacc
gaagacgggcgcatcattgaagtgcaggggacggcagaaggcgagccgttcacccatgaa
gagctactcaccttgttggcgctggcccgagggggaatcgaatccattgtagcgacgcag
aaggcggcgctggcaaactga
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