Enterobacter hormaechei subsp. hoffmannii ECNIH3: ECNIH3_04770
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Entry
ECNIH3_04770 CDS
T03350
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ecla
Enterobacter hormaechei subsp. hoffmannii ECNIH3
Brite
KEGG Orthology (KO) [BR:
ecla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecla03400
]
ECNIH3_04770
DNA repair and recombination proteins [BR:
ecla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ECNIH3_04770
Archaeal homologous recombinant proteins
ECNIH3_04770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
IU_nuc_hydro
Motif
Other DBs
NCBI-ProteinID:
AIN21639
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Position
complement(1006476..1007681)
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AA seq
401 aa
AA seq
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MRILHTSDWHLGQNFYSKSRAAEHEAFLNWLLETAQAHEVDAIIVAGDIFDTGSPPSYAR
ELYNRFVVNLQQTGCHLVIVAGNHDSVATLNESRDILAFLNTTVVASAGHAPQILKKRDG
TPGAVLCPIPFLRPRDIVQSQAGLSGSEKQQHLLQAITRYYHQQHTEACALRGEQAIPIV
ATGHLTTVGASKSDAVREIYIGTLDAFPAQNFPPADYIALGHIHRAQIVGGCEHIRYCGS
PISLSFDETGKAKSVHLVSFTEGKLSAVETLEVPVTQPLAVLKGDLAAITAQLEQWRGAV
LNPPVWLDIEITTDDYLYDMQRKIQTLTEDLPVEVLLVRRSREQREKILLNAQRETLSEL
RVEEVFARRLAHEEVDEARRTRLNELFAHTLHSLNDEDENA
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatacttcacacctcagactggcacctgggtcaaaatttttacagcaaaagccgc
gccgcggaacatgaagcgttcctgaactggctgctggagacggctcaggctcacgaggtg
gacgcaattattgtggcgggcgacatttttgataccggatcgccgccgagctatgcgcgt
gagctgtacaaccgttttgtggtcaacctccagcaaaccggttgtcacctggtgattgtc
gccggaaaccatgactcggtggcgacgctgaatgaatcccgcgatattctggcgttcctc
aataccaccgtggtggccagcgccggacacgcgccgcagatcctgaaaaaacgcgacggc
acgccgggtgcggtgctatgcccaattccgtttttacgcccgcgcgatatcgtgcaaagc
caggcaggcctgtccgggagcgaaaaacagcagcatctgttgcaggccatcacccgctat
tatcaccagcagcatacggaagcctgcgccctgcgcggcgaacaggccattccgatcgtt
gccaccgggcacctcaccaccgtcggggccagtaagagtgatgcggtgcgcgagatttat
atcggtacgctggacgcgtttccagcgcaaaactttcctcccgccgactacattgccctc
gggcatattcaccgggcccagatcgtcggcggctgcgagcatattcgctactgcggctcg
cccatttccctcagttttgacgaaacgggcaaagccaaatccgtgcatctggtgagcttc
accgaaggcaaacttagcgccgttgagacgcttgaggtgccggtcacccagccgctggca
gtgctgaaaggcgatctggccgccattaccgctcagcttgagcagtggcgcggcgcagtg
cttaatccccccgtctggctcgatatcgaaatcaccaccgatgactacctgtacgatatg
cagcgtaaaattcagacgctgacggaagaccttcccgtggaggtgctgctggtacgtcgc
agccgcgagcagcgcgagaaaattctgctgaacgcccagcgtgaaacgcttagcgaactt
cgggttgaagaggtgttcgcgcggcggcttgcgcatgaagaagtggacgaggccaggcgc
accaggcttaacgagctgtttgcccataccttgcattccctcaatgacgaggacgaaaac
gcatga
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