Escherichia coli APEC O78 (APEC): APECO78_14345
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Entry
APECO78_14345 CDS
T02445
Name
(GenBank) transcriptional regulator MirA
KO
K21089
MerR family transcriptional regulator, activator of the csg genes
Organism
ecoa
Escherichia coli APEC O78 (APEC)
Pathway
ecoa02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecoa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
APECO78_14345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoa03000
]
APECO78_14345
Transcription factors [BR:
ecoa03000
]
Prokaryotic type
Helix-turn-helix
MerR family
APECO78_14345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR_1
MerR
HTH_17
HTH_Tnp_1
Terminase_5
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AGC87594
LinkDB
All DBs
Position
2966580..2967311
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AA seq
243 aa
AA seq
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MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRIREIKRWIDNG
VQVSKVKMLLSNENVDVQNGWRDQQETLLTYLQSGNLHSLRTWIKERGQDYPAQTLTTHL
FIPLRRRLQCQQPTLQALLAILDGVLINYIAICLASARKKQGKDALVVGWNIQDTTRLWL
EGWIASQQGWRIDVLAHSLNQLRPELFEGRTLLVWCGENRTSAQQQQLTSWQEQGHDIFP
LGI
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggcgctttacacaattggtgaagtggcgttgctttgtgatattaaccctgtcacgtta
cgcgcgtggcagaggcgttacgggttgctgaaaccgcaacggacagacggcggtcatcga
ctgttcaacgatgccgatattgaccgtatccgcgagatcaaacgctggatcgacaacggc
gtgcaggtcagcaaagttaaaatgctgctcagtaatgaaaatgttgatgtgcagaacggc
tggcgcgatcagcaagaaacattactgacctacctgcaaagcggcaatctgcatagcctg
cgaacgtggatcaaagagcgcggtcaggattaccccgcccagacactcaccacacatctg
tttattcctctgcgccgacgacttcaatgccaacaaccgactctccaggcgctgctggcg
atcctcgacggcgtactgatcaactacatcgccatttgtctggcttcggcacgtaaaaaa
cagggtaaagatgcgctggtggttggctggaatattcaggataccacccgtctgtggctg
gagggctggattgccagtcaacaaggatggcgcattgatgtcctcgcccactcgctcaat
caactacgccctgaactattcgaaggccgtacattgctggtgtggtgcggtgaaaatcga
acctccgcccaacagcagcaactcaccagttggcaagaacaaggccatgatattttccca
ctcggcatttaa
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