Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_0676
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Entry
ECRM13516_0676 CDS
T03011
Symbol
ybgQ
Name
(GenBank) Outer membrane usher protein PmfC
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
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Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
FGGY_N
Motif
Other DBs
NCBI-ProteinID:
AHG13356
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Position
complement(723753..726203)
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AA seq
816 aa
AA seq
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MNIYRLSVLSCLAMVTPPALAAEFNLNVLDKSIRDSVDISLLNQKGVVAPGDYFVAITVN
NNKISNGQQIRWQKSGDKIIPCINESLIELFGLKSDFRKKLPAIKECVDFSVFPEIIFTF
DQANQQLNITIPQAWLAWHSENWTPPSTWNNGIPGFLMDYNLFASTYRPQSGSSSNNLNA
YGTTGLNAGAWRLRSDYQLSQSDSGDNREQSGAISRTYLFRPLPQIGSRLTLGETDFSSN
IFDGFSYTGAALASDDRMLPWELRGYAPQISGIAQTNATVTISHSGRVIYQKKVPPGPFI
IDDLNQSVQGTLDVKVSEEDRRVNNFQVSAASTPFLTRQGQVRYKLAAGRPRSSMSHHTE
DETFISHEVSWGMLSNTSLYGGMLLAGDDYRSGALGIGQNMLWLGALSFDVTWADSHFDT
QQDEQGYSYRFNYSKQVDATNSTISLAAYRFSDRHFHSYANYIDHKYNDADAQDEKQTIS
LSFGQPITPLNLNLYANILHQSWWNADTSTTANITAGFNVDIGDWKDISVSTSFNTTHYE
DKDRDNQIYFSISLPIGESGRLGYDMQNNSNTTTHRMSWNDTLDERNSWGMSAGIQSDRP
DNGAQVSGNYQHLSSAGEWDLTGTYAANDYTSASASWSGSFTATQHGAAFHRRSSTNEPR
LMVSTDGVVDIPIQGNIDYTNRFGIAVVPFVSSYQPTTVAVNMNDLPDGVTVSENVVKET
WTEGAIGFKSLASRAGKDLNVIISDANGHFPPLGADVRQAEGGVSVGMVGENGHAWLSGV
DENQQLTVHWGDQKTCAIHLPEHLEDVAKRLILPCH
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
gtgaatatttatcgactctctgttctttcctgtctggcaatggtaacccctcctgcgctg
gcagctgaatttaaccttaacgttctcgataagtcgattcgggatagcgttgatatttcg
ttgctcaatcaaaaaggcgtcgtagctcccggcgattactttgttgctattacggttaat
aataataaaatcagtaatgggcaacaaattcgctggcaaaaatctggcgataaaattatt
ccttgtatcaatgaatcgctgatcgaactcttcggacttaaatccgactttcgtaaaaaa
ttaccggcaataaaagaatgtgtcgattttagtgtcttccctgaaatcatctttactttc
gatcaggcaaatcaacagctcaatattacaatcccgcaggcatggctggcgtggcattca
gaaaactggacgccaccctcaacgtggaataacggtattcctggcttcctgatggattac
aacctgtttgccagcacttatcgcccacaaagcggcagcagcagcaacaacctgaacgcc
tatggcaccacgggcctcaacgccggggcatggcgtctgcgcagcgattatcagcttagc
cagtccgatagcggcgacaaccgtgaacaatccggggcgatttcacggacctacctgttc
cgcccgttaccgcaaataggttcccgattaaccctgggcgaaaccgattttagctctaac
atttttgatggtttctcctataccggtgcggcgttagccagcgacgatcgaatgctcccc
tgggagttacgcggctacgcgccgcaaatcagcggcatcgcacagactaacgccacggtc
acgataagccattctggtcgcgtgatttaccagaaaaaagttccgccaggcccatttatt
attgatgacctgaatcagtcagtgcaaggtacactggatgtcaaagtgagcgaagaagat
agacgggtgaataacttccaggtttcagcggcctctaccccgttcctgacgcgtcagggc
caggtgcgctataaactggctgccggtcgcccgcgttcctctatgtcgcaccacaccgag
gatgaaaccttcattagccatgaagtctcctggggaatgctctccaacacttcactatat
ggcggcatgcttctcgcaggcgatgactatcgttccggcgcgctgggtattgggcaaaat
atgctctggctgggggcgctgtcgtttgacgtgacctgggccgacagccattttgatact
caacaggatgagcagggttacagctaccgctttaactacagcaaacaggttgatgcgacc
aacagcaccatctcattggcagcctatcgcttctccgatcgccattttcacagctacgct
aactacattgatcacaaatacaatgacgccgacgcgcaggatgaaaagcaaaccatcagc
ctctccttcggtcagcctattactccgctgaatcttaatctctacgccaacatcctgcat
cagagctggtggaatgcggatacctccaccacggccaacattaccgccggttttaacgtc
gacattggcgactggaaagatatttctgtctcgacctcgttcaacaccacccattatgaa
gataaagatcgcgacaaccagatttacttttcgatctccttaccgattggggaaagtggt
cgactgggttatgacatgcagaacaacagtaatactaccacccaccgcatgtcgtggaac
gataccctggatgaacgaaacagttggggaatgtcggctggaatacaatccgatcgcccg
gataacggtgcgcaggtcagcggcaattaccaacacctcagttcggcgggggaatgggat
ctgaccggaacctatgccgccaatgattacacttccgccagtgccagttggagcggctcg
tttaccgcgactcaacatggcgcggcattccatcgccgcagttccaccaatgaaccacgc
ctgatggtcagcaccgacggcgtggtcgatattccgattcagggcaatattgactacacc
aaccgctttggtattgccgtggtaccgtttgtttccagctaccagcctacgacggtggcg
gtcaatatgaacgacttgcctgacggcgttaccgtttccgaaaacgtggtgaaagaaacc
tggaccgaaggcgccatcggctttaaatcgctggcgtcccgcgccgggaaagatctcaac
gtcattatcagcgatgctaacgggcatttcccgccgctcggtgccgatgttcgccaggct
gaaggcggtgtcagcgtcgggatggttggcgaaaacggtcacgcatggctgagtggggtc
gatgaaaatcaacaacttaccgtgcactggggcgaccagaaaacgtgtgccattcatctg
ccggaacatctggaagatgtggctaagcgcctgattttaccctgtcattaa
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