Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_1734
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Entry
ECRM13516_1734 CDS
T03011
Symbol
ydaK
Name
(GenBank) Regulatory protein
KO
K14057
LysR family transcriptional regulator, regulator of abg operon
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoh03000
]
ECRM13516_1734 (ydaK)
Transcription factors [BR:
ecoh03000
]
Prokaryotic type
Helix-turn-helix
LysR family
ECRM13516_1734 (ydaK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AHG14401
LinkDB
All DBs
Position
1714661..1715569
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AA seq
302 aa
AA seq
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MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT
LTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ
HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP
AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF
LSILPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYQ
QS
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggcttttcaggtaaaaattcatcaaattcgggcttttgttgaagtggctcgtcagggc
agcattcgcggagcgagccgaatgttgaatatgtcgcaaccggcactgagtaaatctatt
caggagctagaagaagggttagcggcgcaactcttttttcgccgtagtaaaggcgtgacg
ttaactgatgccggtgaaagtttttatcagcacgccagtcttattcttgaagagctgcgc
gcagcccaagaggatattcgccaacgacaagggcaactggcagggcagattaatatcggc
atgggggccagtatttcccgcagtctgatgccagctgtcatatctcgttttcatcagcag
catccgcaggtaaaagtacgcattatggaagggcaactggtgtcgatgattaatgaattg
cgtcagggagaattggatttcaccatcaatacctattatcagggaccgtacgaccacgaa
tttacttttgagaaattactggaaaagcaattcgcgatcttttgccgcccgggacacccc
gccattggtgcccgttcgatcaaacagttactggattacagctggacaatgccgacgcca
cacggcagctactacaaacagttgagtgaattgcttgacgatcaggcgcaaacgccacag
gtcggtgtagtctgcgagacgttctcagcctgtatcagtctggtggcaaaaagcgatttt
ctcagcatactgcctgaagaaatgggctgcgatcccttgcacggacaggggctggtgatg
ttgccggttagcgaaattttaccgaaagcggcctattatttgattcagcggcgtgatagt
cgccagacaccactgaccgcgtcattaatcacgcaattccggcgagaatgcggctatcag
caaagttaa
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