KEGG   Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_2408
Entry
ECRM13516_2408    CDS       T03011                                 
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
  KO
K02405  RNA polymerase sigma factor FliA
Organism
ecoh  Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh02020  Two-component system
ecoh02026  Biofilm formation - Escherichia coli
ecoh02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ecoh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ECRM13516_2408 (fliA)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02026 Biofilm formation - Escherichia coli
    ECRM13516_2408 (fliA)
  09142 Cell motility
   02040 Flagellar assembly
    ECRM13516_2408 (fliA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ecoh03021]
    ECRM13516_2408 (fliA)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:ecoh02035]
    ECRM13516_2408 (fliA)
Transcription machinery [BR:ecoh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ECRM13516_2408 (fliA)
Bacterial motility proteins [BR:ecoh02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    ECRM13516_2408 (fliA)
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r4 Sigma70_r2 Sigma70_r4_2 UPF0147 UPF0122 TFIIE_alpha SapB_1
Other DBs
NCBI-ProteinID: AHG15070
LinkDB
Position
complement(2374540..2375259)
AA seq 239 aa
MNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYD
ALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQAIGQLEQELGRNATETEV
AERLGIDIADYRQMLLDTNNSQLFSYDEWREEHGDSIELVTDDHQRENPLQQLLDSNLRQ
RVMEAIETLPEREKLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRTKLGKL
NT seq 720 nt   +upstreamnt  +downstreamnt
gtgaattcactctataccgctgaaggtgtaatggataaacactcgctgtggcagcgttat
gtcccgctggtgcgtcacgaagcattgcgcctgcaggttcgactgcccgcgagcgtggaa
cttgacgatctgctacaggcgggcggcattgggttacttaatgccgtcgaacgctatgac
gccctacaaggaacggcatttacaacttacgcagtgcagcgtatccgtggcgctatgctg
gatgaacttcgcagccgtgactgggtgccgcgcagcgtgcgacgcaacgcgcgtgaagtg
gcacaggcaatagggcaactggagcaggaacttggccgcaacgccacggaaactgaggta
gcggaacgtttagggatcgatattgccgattatcgccaaatgttgctcgacaccaataac
agccagctcttctcctacgatgagtggcgcgaagagcacggcgatagcatcgaactggtt
actgatgatcatcagcgagaaaacccgctacaacaactactggacagtaatctgcgccag
cgggtgatggaagccatcgaaacgttgccggagcgcgaaaaactggtattaaccctctat
taccaggaagagctgaatctcaaagagattggcgcggtgctggaggtcggggaatcgcgg
gtcagtcagttacacagccaggctattaaacggttacgcactaaactgggtaagttataa

DBGET integrated database retrieval system