KEGG   Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_3734
Entry
ECRM13516_3734    CDS       T03011                                 
Name
(GenBank) Type II/IV secretion system secretin RcpA/CpaC
  KO
K02280  pilus assembly protein CpaC
Organism
ecoh  Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ecoh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ECRM13516_3734
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ecoh02044]
    ECRM13516_3734
   02035 Bacterial motility proteins [BR:ecoh02035]
    ECRM13516_3734
Secretion system [BR:ecoh02044]
 Type II secretion system
  Tight adherence (Tad) export apparatus
   ECRM13516_3734
Bacterial motility proteins [BR:ecoh02035]
 Pilus system
  Pilus assembly proteins
   ECRM13516_3734
SSDB
Motif
Pfam: Secretin T2SS-T3SS_pil_N BON
Other DBs
NCBI-ProteinID: AHG16363
LinkDB
Position
complement(3692894..3694162)
AA seq 422 aa
MGSGDSQVIQAQDDIDTVFISTPEIADYEIINDHSVMVYAREPGRTDLTVFDKNGDELVK
TTIIVDPVLSAVQKQISMISPDSHVSIQKMGKTYIISGTVPTEEDRDKVYQLVGEGIGAK
KVVNKKQVASLGASSGSDLNTDNSNSWLDEVIYEDVINKLQLPITNQVNVKLSVVEVTKT
FTDNVGIDWGTTGTSPGSFRFIKFDADTLTGLVHAISNDSVARVLAEPNLSVLSGETAEF
LVGGEVPVVTSSGNNGTNVQYKEFGIKLNVGAKVSSTKNIRITLGEEVSNVDDKFNTDSG
DSFPTFQTRRARTTVELADGESFLLGGLISNNELESLSKIPFIGDVPILGSLFRNASTER
SRSELMVVATVNLVKPVGILDVVVPDFQRTSTWARFLNLDGISNSHDRKQAQNFVEKGGF
IK
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgggatcaggtgactcccaggtcattcaggcgcaggatgatattgatactgtatttatt
tcaacgcctgagatagcagattatgaaattataaacgaccacagcgttatggtttacgcg
cgcgaacctgggcgtaccgatctgactgtatttgataaaaatggtgatgagctggttaaa
acaacaattattgtcgatcctgttttgagcgctgtacaaaaacaaatatcgatgatttcg
cctgacagccatgtttcaattcagaaaatgggcaaaacttatatcataagtggcacggtg
cctaccgaagaggacagggataaagtttatcagcttgttggtgaagggattggtgctaaa
aaagttgtgaataaaaaacaggttgcctccctgggcgcttcctcgggtagcgatttaaat
acagataactctaattcctggctggatgaagttatctatgaagacgtgattaataagctt
cagctacccatcaccaatcaggtaaacgtcaaactttccgttgtggaagtgactaagacg
tttactgacaacgtcgggatcgattggggaacaacgggtacttctcctggctcgttccgc
tttattaaatttgatgcggacacattaacgggactggtccatgcaatcagtaatgattca
gttgcacgtgtattagctgaacctaacctttccgttctgtccggcgaaacagccgaattt
ctggtcgggggggaagtccctgtggttaccagttcgggcaacaatggtactaacgtccag
tataaagagttcggtatcaagttgaatgttggggccaaggtaagcagcacaaagaatatt
cgtattactcttggtgaagaagtcagtaatgtagatgacaaatttaacactgacagcggt
gatagtttcccaactttccagacgcggcgggcacggacaaccgttgaacttgctgatggc
gaaagcttcttactcggtggattaatcagtaataacgagcttgagtcattatctaaaatt
ccattcattggcgatgttcctattctgggatcactgttcaggaatgcctctacagaacgt
agccgtagcgaacttatggttgttgcaaccgtaaatcttgtgaaaccagtaggcattctt
gatgttgttgttcctgatttccaaagaacatcgacatgggcacgttttctcaatctcgac
ggaatcagcaattctcacgatcgcaaacaggcgcagaattttgtggagaagggagggttt
atcaaatga

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