KEGG   Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_0109
Entry
ECRM13514_0109    CDS       T03010                                 
Symbol
hofB
Name
(GenBank) Type IV fimbrial assembly, ATPase PilB
  KO
K02504  protein transport protein HofB
Organism
ecoo  Escherichia coli O145:H28 RM13514 (EHEC)
Brite
KEGG Orthology (KO) [BR:ecoo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ecoo02044]
    ECRM13514_0109 (hofB)
Secretion system [BR:ecoo02044]
 Type II secretion system
  Type IVa pilus homolog protein
   ECRM13514_0109 (hofB)
SSDB
Motif
Pfam: T2SSE MshEN AAA_16 AAA_22 AAA_7 AAA_30 AAA_14 ResIII AAA_29 AAA_11 nSTAND3 DEAD AAA AAA_19 AAA_23 Sigma54_activ_2 PhoH SLFN-g3_helicase
Other DBs
NCBI-ProteinID: AHG06813
LinkDB
Position
complement(120238..121623)
AA seq 461 aa
MNIPQLTALCLRYQGVLLDASEEVVHVAVVDAPSHELLDALHFATTKRIEITCWTRQQME
GHASRTQQTLPVAVQEKHQPKAELLTRTLQSALEQRASDIHIEPADNAYRIRLRIDGVLH
PLPDVSPDAGVALTARLKVLGNLDIAEHRLPQDGQFTVELAGNAVSFRIATLPCRGGEKL
VLRLLQQVSQALDVNTLGMQPLQLADFAHALQQPQGLVLVTGPTGSGKTVTLYSALQTLN
TADINICSVEDPVEIPIAGLNQTQIHPRAGLTFQGVLRALLRQDPDVIMIGEIRDGETAE
IAIKAAQTGHLVLSTLHTNSTCETLVRLQQMGVARWMLSSALTLVIAQRLVRKLCPHCRQ
QQGEPIHIPDNVWPSPLPHWQAPGCVHCYHGFYGRTALFEVLPITPVIRQLISANTDVES
LETHARQAGMRTLFENGCLAVEQGLTTFEELIRVLGMPHGE
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgaatattccacagctcacggccctgtgcctgcgttatcagggagtcttgctggatgcc
agcgaagaagtggttcatgttgcggtggtcgatgccccctcacatgagttgctggacgca
ttgcatttcgctaccaccaaacgtattgagatcacctgctggacgcgccaacaaatggaa
ggtcacgccagtcgcacacaacagacattgcccgtagctgttcaggagaagcatcagccc
aaagcagagttgctgactcgaacgttacaatctgcgctggaacaacgcgcgtctgatatt
catatcgaaccagcggacaatgcctaccgcatccgcttgcgtatcgacggcgtattgcat
cctttaccggatgtttcaccggatgccggagtcgcattaaccgccagattaaaagtgctg
ggaaacctggatattgcggaacatcgcctgccgcaggacgggcaattcactgtcgaactg
gcaggaaacgccgtctcatttcgtattgcgaccttaccatgtcggggtggtgaaaagctg
gtattaaggttgttacagcaggtgagccaggcactggatgtcaacacgcttggaatgcag
ccattacaactggcggactttgctcatgccttgcaacaaccacagggactggtgctggta
actggccctaccggcagcggcaaaacggtcacgctttatagtgccctgcaaacgctgaat
accgctgacattaatatttgtagcgtcgaagatccggttgagatccccatagccggacta
aaccagacgcaaatccatccacgtgccggactcacctttcagggcgttttgcgtgcgtta
ttgcgccaggatcctgacgtcatcatgatcggagagatccgcgatggcgaaacggcagaa
attgccattaaagccgcgcaaaccggtcacctggtgttgtctaccctacacactaattcc
acctgcgaaacgctggtacgtttacagcaaatgggagtcgcccgctggatgctctcatca
gcgcttacgctggtaatagcccagcgtctggtacgtaaactttgcccacattgtcgccag
cagcaaggggagcccatccatattccagacaatgtatggccgtcgccgctgccccactgg
caggcacccggttgtgtacattgctaccacggtttttatggtcgcacggccttatttgaa
gttctgcccataacaccggtcatacgtcagcttatttccgctaataccgacgttgaatcg
ctggaaactcacgcccgacaggcgggtatgcgtacgctttttgaaaacggctgcctcgcc
gtggagcaaggcttaaccacctttgaagagttaatccgcgtactggggatgccgcatggc
gagtaa

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