Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_4352
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Entry
ECRM13514_4352 CDS
T03010
Symbol
yhgF
Name
(GenBank) Transcription accessory protein (S1 RNA-binding domain)
KO
K06959
protein Tex
Organism
ecoo
Escherichia coli O145:H28 RM13514 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoo00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
ECRM13514_4352 (yhgF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_N
Tex_YqgF
HHH_3
S1
HHH_9
HHH_7
YqgF
T2SSK
HHH_6
DUF2000
Motif
Other DBs
NCBI-ProteinID:
AHG11002
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All DBs
Position
4225577..4227898
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AA seq
773 aa
AA seq
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MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL
GYLRELEERRQAILKSISEQGKLTDDLANAINATLSKTELEDLYLPYKPKRRTRGQIAIE
AGLEPLANLLWSDPSHTPEVAAAQYIDADKGVADTKAALDGARYILMERFAEDAALLAKV
RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN
ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR
ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH
TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA
SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA
RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS
RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKELMGNSSELRNL
KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN
VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR
LDEQPGETNSRRGGGNDRPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgattcgttctgccgcattattgcgggtgaaattcaggcgcgcccggaacag
gttgacgctgccgttcgcctgcttgacgaagggaataccgtgccgtttatcgcacgttat
cgtaaggaaatcaccggcggtctggatgacacgcagttgcgtaatctggaaacgcgtctg
ggatacctgcgtgaactggaagagagacgtcaggcgatcctcaaatccatttccgagcaa
ggcaaactcaccgatgatctggcgaatgccatcaacgccaccctaagcaaaaccgaactc
gaagacctctacctgccctacaaacctaaacgccgcacccgcgggcaaatcgccattgaa
gcagggcttgagccgttggctaacctgctgtggagcgatccgtcacacacgccagaagtc
gccgctgcgcaatatattgatgccgataaaggcgtggcagataccaaagccgcgctggac
ggcgcgcgctatatcctgatggaacggtttgccgaagatgccgcgctgctggcgaaagtg
cgtgattatctgtggaagaacgcgcatttggtttctacggtggtgagcggtaaagaagag
gaaggggcgaaattccgcgactatttcgatcatcacgaaccgttgtccacggtgccttct
caccgcgcgctggcgatgttccgtgggcgtaacgaaggcgtacttcagctttcgctgaat
gccgatccacagttcgatgagccgccgaaagagagctattgcgagcaaatcatcatggat
caccttggcctgcgcctgaacaatgccccggcggatagctggcgcaaaggcgtggtgagc
tggacgtggcgcatcaaggtgctgatgcatctggaaaccgaactgatgggcaccgtgcgc
gaacgtgcggaagatgaagcaatcaacgtctttgcccgtaacctgcacgatctgctgatg
gcggctccagccggactgcgtgccacgatgggcctcgatccgggtctgcgtactggggta
aaagtggcggtagtcgatgcaaccggcaaactggtggcgaccgataccatttacccgcac
accggacaagccgcaaaagcagcgatgactgttgctgcgctgtgtgaaaagcataacgtt
gaactggtggcgatcggcaacggtacagcttcccgcgaaaccgaacgtttctatctcgac
gtgcagaagcagttcccgaaagtgaccgcacagaaagtgatcgtcagcgaagctggcgcg
tcggtttactcggcttccgagctggcagcgcaggagttcccggatctcgacgtttcgctg
cgtggcgcggtttctatcgcccgccgtttgcaggatccgctggcggagctggtgaaaatc
gatccgaaatctatcggcgtaggtcagtatcagcatgacgtcagccagacgcaactggcc
cgcaaactggatgcagtagtagaagactgcgtaaacgccgttggcgtcgatctcaacacc
gcttctgttccgctattaactcgcgtggcgggcctgacgcgcatgatggcgcaaaacatc
gtggcctggcgcgatgagaacggccagttccagaaccgtcagcaactgctgaaagtcagc
cgtctggggccgaaagccttcgagcagtgcgcgggcttcctgcgcattaaccacggtgat
aacccgctggacgcctctaccgttcacccggaagcctatccggtggtggaacgcattctg
gcagcaacacagcaggcactgaaagagctgatgggtaacagcagcgaactgcgtaacctg
aaagcgtctgactttactgatgaaaaattcggtgtgccgacagtaactgacatcatcaaa
gagctggaaaaaccgggtcgcgatccgcgtccggaatttaaaaccgctcagtttgccgat
ggcgtcgagacaatgaacgacctgcaaccgggtatgatcctcgaaggcgctgtcaccaac
gtcaccaactttggcgcgtttgtcgatatcggcgtgcatcaggacggcctggttcacatc
tcttcattgtcgaacaagtttgtggaagatccgcataccgtggtgaaagcgggcgacatt
gtgaaggtgaaagtgctggaagtggatcttcagcgtaaacgtatcgccctgactatgcgt
ctggacgagcagcctggcgaaaccaactctcgtcgcggcggcggtaacgatcgcccgcaa
aacaaccgcccggcagccaaaccacgcggtcgtgaagcgcagcctgccggtaacagcgcg
atgatggacgcgctggcggcagcgatgggtaaaaaacgttaa
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