Escherichia coli O25b K100 H4-ST131 EC958 (UPEC): EC958_4790
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Entry
EC958_4790 CDS
T04373
Name
(GenBank) RNA polymerase, sigma 19 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ecos
Escherichia coli O25b:K100:H4-ST131 EC958 (UPEC)
Pathway
ecos02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ecos00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EC958_4790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecos03021
]
EC958_4790
Transcription machinery [BR:
ecos03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EC958_4790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_24
HTH_23
HTH_28
HTH_36
HTH_11
GerE
TnsD
PCI
HTH_40
HTH_3
MarR
HTH_Mga
HTH_10
Motif
Other DBs
NCBI-ProteinID:
CDN85191
UniProt:
A0AA36L363
LinkDB
All DBs
Position
complement(4952358..4952879)
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AA seq
173 aa
AA seq
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MSDRATTTASLTFESLYGTHHGWLKSWLTRKLQSAFDADDIAQDTFLRVMVSETLSTIRD
PRSFLCTIAKRVMVDLFRRNALEKAYLEMLALMPEGGAPSPEERESQLETLQLLDSMLDG
LNGKTREAFLLSQLDGLTYSEIAHKLGVSISSVKKYVAKAVEHCLLFRLEYGL
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccgcgccactaccacagcttccttaacgttcgagtcgctttatggcacacat
cacggctggttgaaaagctggctgacgcgcaaactccagtctgcttttgatgcagatgac
attgcccaggacacttttttgcgggtaatggtcagcgaaacgctctcgacgatccgcgat
cctcgctccttcctctgcactatcgccaaacgcgtgatggtggacctgtttcgccgaaac
gcgctggaaaaagcgtatctggagatgctggcgcttatgccggaggggggagcgccttca
cctgaggaacgcgaaagccaactcgagaccctacaactcctcgacagcatgctggacggg
ctaaacggcaaaacacgtgaagcgtttctgctttcgcaactggatggtctgacatacagc
gagattgcgcacaaactcggtgtttccatcagctccgtgaaaaaatacgtggcgaaagcc
gtcgagcactgcctgctgttccgtctggagtatgggttatga
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