Escherichia coli O81 ED1a (commensal): ECED1_4229
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Entry
ECED1_4229 CDS
T00827
Symbol
lpfC
Name
(GenBank) Outer membrane usher protein lpfC precursor
KO
K07347
outer membrane usher protein
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Pathway
ecq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ECED1_4229 (lpfC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecq02000
]
ECED1_4229 (lpfC)
02044 Secretion system [BR:
ecq02044
]
ECED1_4229 (lpfC)
02035 Bacterial motility proteins [BR:
ecq02035
]
ECED1_4229 (lpfC)
Transporters [BR:
ecq02000
]
Other transporters
Pores ion channels [TC:
1
]
ECED1_4229 (lpfC)
Secretion system [BR:
ecq02044
]
Chaperone-usher system
Type 1 pilus assembly protein
ECED1_4229 (lpfC)
Bacterial motility proteins [BR:
ecq02035
]
Pilus system
Fimbrial proteins
ECED1_4229 (lpfC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
Motif
Other DBs
NCBI-ProteinID:
CAR10360
UniProt:
B7N1Y9
LinkDB
All DBs
Position
complement(4149253..4151784)
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AA seq
843 aa
AA seq
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MHWMHLPLDHYRAHFSFSLLALTIASALPAYGGKFNPKFLENVQGIDQHVDLSVYDFPVG
QQIPGKYRVFVFVNEEKMASRTLDFSTASEAQRKASGESLMPCLSRVQLEEMGVRVDSFP
ALKILPPEACVAFDEIIPQATSRFDFNTQTLHLTFPQAAMMMTARGTVDPSRWDEGIPAL
LLDYSFSGSNGRNEGSGSSPDSTSDSYYLNLRSGLNVGPWRLRNNSIWNRTDGKNQWDNV
GTSLNRAIIPLKSQITLGDTATPGEIFDSVQMRGALLASDDEMLPDSQRGFAPVVRGIAK
SNAEVSIEQNGYVIYRTFVQPGAFEINDLYATSGSGDLTVIIKESDGSEQRFIQPFSAVA
IFQREGYLKYSLAAGEYRAGNYDSGKPRFGQFTAMYGLPWGMTAYGGALLSADYNALALG
LGKNFGTIGAVSVDVTQAKSQLRNNEKDEGQSYRFLYSKSFEGGTDLRLLGYKYSTSGYY
TFQEATDVRSDADSDYRRYHKRSQIQGNITQQLGDYGSVYFNMTQQDYWNVDGKENSLSA
GYHGHIGRVNYSIAYTWTRSPEWDEDDRLWSFSLSIPLGGAWGSYRMTTDQNGKTSQQAS
VSGTLLEDRNLNYNVQQGYTSNGVGNSGSVNMGYMGGSGNIDVGYNYSKDNQQVNYGVRG
GVIVHSEGITLSQPLGESLAIVSAPGARGGHVVNSSGVEVDWMGNAVVPYLTPYRETIVE
LRSDTLGQNVELQEAFQKVVPTRGAIVRSRFDTRVGYRVLMSLKRANGNAVPFGATAALS
DESKPASSIVGEEGQLYISGMPEEGELQVSWGHEQAQRCRVPFRLPEKKDNSGIVMVNAV
CDK
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgcattggatgcatttacctcttgatcactacagagcgcatttttctttctcactgttg
gcattaactattgccagcgcgttacctgcgtacggcggaaaattcaaccctaaatttctt
gaaaatgttcagggtattgatcaacacgtcgatttgtcagtttacgactttcctgtcggc
cagcaaatacccggtaaatatcgggtatttgtgtttgtaaacgaagaaaaaatggcttcc
cggacgctggattttagtactgccagcgaagcacaacgcaaagccagcggcgagtcgctt
atgccttgccttagccgtgttcaactggaagaaatgggcgtgcgcgtcgacagctttccg
gcactgaagatattgccaccggaagcctgcgtagcgtttgatgaaatcattccccaggcc
accagtcgttttgattttaatactcagacgttgcatcttacctttccacaggcagcaatg
atgatgaccgctcgtggcacggttgatccttctcgctgggacgaaggaatacctgcgctg
ttactggactacagctttagtggcagcaatggtcgcaacgaaggttccggttcatctcca
gattcgaccagtgacagttattacctgaacctgcgcagcggtttgaacgtggggccgtgg
cgtttacgtaataacagtatctggaaccgtaccgatggcaaaaatcaatgggataacgtt
ggtacatcgttaaaccgggcgattattccactcaagtcacagataacattgggtgatacc
gccacgcctggcgagatttttgatagcgtacaaatgcgcggggcattattggcatccgac
gatgaaatgttgccggatagccagcgtggctttgctccggtggtgcgtggcatcgccaaa
agtaacgctgaagtgagtatcgaacagaacggatatgttatttatcgtacctttgttcag
ccgggcgcatttgagattaacgatctctacgcaacctccggcagcggtgacttgacggtg
atcattaaagaatctgacggaagtgaacaacgttttattcaaccattttcggcagtggcg
attttccagcgtgaagggtatctgaaatacagccttgctgccggtgagtatcgtgccggt
aattacgacagcggtaaaccgcgattcgggcaatttactgccatgtacggcttgccgtgg
ggaatgaccgcctatggtggtgcgttgctatcggcagactacaacgctttagctctgggg
ctggggaaaaacttcggcaccattggtgcggtatcggtggatgtcacccaggcgaaaagt
cagttacgcaacaatgaaaaagatgaagggcagtcttatcgtttcctctattcgaaaagt
tttgagggcggtaccgacctgcgtctgttgggctacaagtactcaaccagcggttattac
accttccaggaagcgaccgatgtccgtagtgacgccgacagtgactatcggcgttatcat
aagcgcagccagatacaaggtaacatcactcagcaactgggagactacggttctgtttac
ttcaatatgacgcagcaggattactggaacgttgatggtaaggagaactccttaagcgct
ggttatcacggtcatattggtcgtgtgaattacagtatcgcctatacctggacgagaagc
cctgaatgggatgaagacgatcgactgtggtcatttagcctctcaataccgctgggtggc
gcatggggcagttatcgtatgaccaccgaccagaacggcaagacgtcacaacaggcctct
gtcagcggcacattactggaagatcgtaacttgaactataacgttcagcagggttatacc
agtaatggggttggcaacagtggtagtgtcaacatgggttatatgggaggttctggcaac
attgacgtgggttataactattccaaagataaccaacaagttaactatggtgtgcgtggt
ggagtcattgttcacagtgaaggtatcactctctcgcaacccttgggtgaaagtctggca
attgtttctgcgccgggtgcgcgtggtggacatgtagtaaatagcagcggcgttgaagtt
gactggatgggcaacgcagtggtgccgtatctcacgccatatcgtgaaaccattgtggaa
ttgcgcagcgacacgttagggcaaaacgttgaattacaggaagcgtttcagaaagtcgtt
ccaacgcgtggggcgatagtccgttcccgctttgatacgcgtgtcggttatcgtgtgctg
atgagtttgaaacgggcgaatggcaacgcagtaccgtttggtgctaccgcagcgttaagt
gatgagagcaaacctgccagcagcattgtgggtgaagaaggacagctttatatcagcggg
atgccagaagagggcgaattgcaggtgagctgggggcacgagcaggcgcaacgttgccgc
gtgccattccgcttgccagagaaaaaggataattcgggtatcgtgatggttaatgcggta
tgcgataaataa
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