Escherichia coli O8 IAI1 (commensal): ECIAI1_3017
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Entry
ECIAI1_3017 CDS
T00828
Symbol
ygfZ
Name
(GenBank) enzyme component involved in 2-methylthio-6-iodeadenosine formation
KO
K06980
tRNA-modifying protein YgfZ
Organism
ecr
Escherichia coli O8 IAI1 (commensal)
Brite
KEGG Orthology (KO) [BR:
ecr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecr03016
]
ECIAI1_3017 (ygfZ)
Transfer RNA biogenesis [BR:
ecr03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
ECIAI1_3017 (ygfZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YgfZ_barrel
GCV_T
Sortase
DUF6237
Motif
Other DBs
NCBI-ProteinID:
CAQ99832
UniProt:
B7LYG2
LinkDB
All DBs
Position
3099388..3100368
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AA seq
326 aa
AA seq
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MAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLA
AHCDAKGKMWSNLRLFRDGDGFAWIERRSVREPQLTELKKYAVFSKVTIAPDDERVLLGV
AGFQARAALANLFSELPSKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGE
AELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKF
RGANKRALWLLAGSASRLPEAGEDLELKMGENWRRTGTVLAAVKLEDGQVVVQVVMNNDM
EPDSIFRVRDDANTLHIEPLPYSLEE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcttttacaccttttcctccccgtcagcctacggcttctgcccgtttaccgctgacg
ctgatgacgcttgatgactgggcgcttgccaccattactggcgcggacagcgaaaaatat
atgcagggtcaggtgacagcagatgtcagccagatggcagaagatcagcacctgctcgcc
gcccattgcgacgccaaaggtaaaatgtggagcaatttacgtctgttccgcgacggcgat
ggctttgcatggattgaacggcgcagcgtgcgtgaaccgcagctgactgaactgaaaaaa
tatgcggtattctctaaagtgaccatcgcgccagacgacgagcgtgtgctgcttggtgtt
gccggttttcaggcgcgcgccgcgctggcaaatctctttagcgaactgccttcgaaagaa
aaacaggtagtcaaagaaggcgcgaccactttgctatggtttgaacacccggcagaacgt
ttcctgatcgtaaccgatgaagctactgctaatatgctgaccgataaactgcgcggtgaa
gcggaactgaacaatagccaacagtggctggcattaaacattgaagcgggtttcccggtg
attgatgccgccaacagcgggcagtttatcccacaggcgaccaatctccaggcgctgggc
ggtatcagctttaagaaaggctgttataccggacaagagatggtggcgcgagcaaaattc
cgtggtgccaacaaacgcgcgctctggttgctggcaggtagcgccagccgactgccggaa
gctggtgaagacttagagctgaaaatgggcgagaactggcgtcgtaccggtacggtgctg
gctgcggtaaaactggaagatggtcaggtcgtggtacaggtcgtcatgaataacgatatg
gaaccggacagcatcttccgcgtacgcgacgatgcgaatacactgcatatcgagccgctg
ccgtattcgctcgaagagtaa
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