Escherichia coli O8 IAI1 (commensal): ECIAI1_4023
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Entry
ECIAI1_4023 CDS
T00828
Symbol
metR
Name
(GenBank) DNA-binding transcriptional activator, homocysteine-binding
KO
K03576
LysR family transcriptional regulator, regulator for metE and metH
Organism
ecr
Escherichia coli O8 IAI1 (commensal)
Brite
KEGG Orthology (KO) [BR:
ecr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecr03000
]
ECIAI1_4023 (metR)
Transcription factors [BR:
ecr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
ECIAI1_4023 (metR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Zn_finger_prot
Motif
Other DBs
NCBI-ProteinID:
CAR00804
LinkDB
All DBs
Position
complement(4092108..4093061)
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AA seq
317 aa
AA seq
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MIEVKHLKTLQALRNCGSLAAAAATLHQTQSALSHQFSDLEQRLGFRLFVRKSQPLRFTP
QGEILLQLANQVLPQISQALQACNEPQQTRLRIAIECHSCIQWLTPALENFHKNWPQVEM
DFKSGVTFDPQPALQQGELDLVMTSDILPRSGLHYSPMFDYEVRLVLAPDHPLAAKTRIT
PEDLASETLLIYPVQRSRLDVWRHFLQPAGVSPSLKSVDNTLLLIQMVAARMGIAALPHW
VVESFERQGLVVTKTLGEGLWSRLYAAVRDGEQRQPITEAFIRSARNHACDHLPFVKSAE
RPTYDAPTVRPGSPARL
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagtaaaacacctgaaaacgctacaagcgttgcggaactgcggctctctcgca
gccgctgcggcgacgttgcatcagacgcaatccgccctgtctcaccagtttagcgatctg
gaacaacgccttggcttccggctatttgtgcgtaagagccagccgctacgctttacaccg
cagggagaaatcctgttgcaactggcaaaccaggtgctgccgcaaattagccaggcactg
caagcctgcaatgaaccgcagcagacgcgtctgcgcattgccattgagtgccatagctgt
attcagtggctgacgcccgcgttagaaaatttccataagaactggccgcaggtagagatg
gattttaaatcgggcgtgacgtttgacccgcagcccgcgttgcaacagggcgagctggat
ctggtgatgacctccgatatcctgccgcgcagtggcctgcattattcgccgatgttcgac
tatgaagtgcgtctggtgttagcacctgaccatccactggcggcgaaaacgcgaattaca
ccggaagatctcgccagcgagacgctgttgatttatccggtgcagcgtagtcgactggat
gtctggcggcattttcttcagccggcaggcgtcagcccgtcactgaaaagcgtcgataac
accttattgttgattcagatggttgccgcgcggatgggtattgccgcgctaccgcattgg
gtagtagagagttttgagcgccagggtctggtggtgaccaaaaccctgggcgaaggcttg
tggagccgactgtacgccgccgtgcgcgatggcgagcagcgtcagccgattacagaagca
tttattcgctcagcgcgcaatcacgcctgcgatcatctgccgtttgtgaagagcgcggag
cgacccacttacgatgcacccacagtgaggccaggatcaccagcgcgcctgtaa
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