Escherichia coli O45 K1 H7 S88 (ExPEC): ECS88_1793
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Entry
ECS88_1793 CDS
T00830
Symbol
ydjQ
Name
(GenBank) endonuclease of nucleotide excision repair
KO
K05984
excinuclease Cho [EC:3.1.25.-]
Organism
ecz
Escherichia coli O45:K1:H7 S88 (ExPEC)
Brite
KEGG Orthology (KO) [BR:
ecz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecz03400
]
ECS88_1793 (ydjQ)
DNA repair and recombination proteins [BR:
ecz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ECS88_1793 (ydjQ)
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Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
Motif
Other DBs
NCBI-ProteinID:
CAR03101
UniProt:
B7MAV2
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Position
1785410..1786297
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AA seq
295 aa
AA seq
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MVRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSINIRSR
VLSHLRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ
LNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRA
CFRSALKRCAGACCGKESHDDHALRLRQSLERLRVVCWPWKGAVALKEQHPEMTQYHIIQ
NWLWLGAVNSLKEATTLIRAPAGFDHDGYKILCKPLLSGNYEITELDPVNDQQAS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtggtacggcgtttaacttctccgcggctcgaatttgaagctgcggcaatttatgaatat
cccgaacatttacgttcattccttaatgacttacccacccgacctggggtgtatctgttt
catggcgaaagtgacaccatgccgctctatatcggcaaaagcattaacatccgcagccgc
gtcctttctcatttacgtaccccggatgaagccgccatgctacggcaatcccgacgcatc
agctggatatgtaccgccggtgaaatcggcgctctgctccttgaagcgcgattaatcaaa
gaacaacagccactgtttaataaacgcttgcggcgcaatcgccagctctgtgccctgcaa
ttaaatgaaaagcgcgtcgatgtggtgtatgccaaagaggtggatttttcacgagccccc
aacctgtttggcctgtttgccaataggcgcgcagctttgcaagcattacagaccatcgct
gatgaacaaaaactttgttatggcctgttgggactggagccgttaagtcgcggtcgtgca
tgttttcgttcagcgctaaaacgttgcgccggagcatgctgcggtaaagagagccatgac
gatcatgcgctacgtttgcgccagtctctggaacgtttacgagtcgtttgttggccgtgg
aaaggtgcggtagcgctgaaagaacagcacccggaaatgactcaatatcatattattcaa
aactggctgtggctgggggcggttaattcgctgaaagaagcgacaacgttaattcgggca
cccgccgggtttgatcacgacggttataaaattctttgtaagccgctgctttccggtaac
tatgaaattactgaacttgatccggtgaatgaccagcaagccagttga
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