Escherichia coli DH1: ECDH1ME8569_1394
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Entry
ECDH1ME8569_1394 CDS
T02102
Symbol
yncD
Name
(GenBank) putative iron outer membrane transporter
KO
K02014
iron complex outermembrane recepter protein
Organism
edj
Escherichia coli DH1
Brite
KEGG Orthology (KO) [BR:
edj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
edj02000
]
ECDH1ME8569_1394 (yncD)
Transporters [BR:
edj02000
]
Other transporters
Pores ion channels [TC:
1
]
ECDH1ME8569_1394 (yncD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
BAJ43250
LinkDB
All DBs
Position
complement(1503145..1505163)
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AA seq
672 aa
AA seq
DB search
MIVSAAPQVVSELDTPAAVSVVDGEEMRLATPRINLSESLTGVPGLQVQNRQNYAQDLQL
SIRGFGSRSTYGIRGIRLYVDGIPATMPDGQGQTSNIDLSSVQNVEVLRGPFSALYGNAS
GGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKATGATGDGTQPGDVDYTVSTTRFTTH
GYRDHSGAQKNLANAKLGVRIDEASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRAE
QYDTRKTIKQTQAGLRYERSLSSRDDMSVMMYAGERETTQYQSIPMAPQLNPSHAGGVIT
LQRHYQGIDSRWTHRGELGVPVTFTTGLNYENMSENRKGYNNFRLNSGMPEYGQKGELRR
DERNLMWNIDPYLQTQWQLSEKLSLDAGVRYSSVWFDSNDHYVTPGNGDDSGDASYHKWL
PAGSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQSGMNLGLKPSTNDTIEIGSKTR
IGDGLLSLALFQTDTDDEIVVDSSSGGRTTYKNAGKTRRQGAELAWDQRFAGDFRVNASW
TWLDATYRSNVCNEQDCNGNRMPGIARNMGFASIGYVPEDGWYAGTEARYMGDIMADDEN
TAKAPSYTLVGLFTGYKYNYHNLTVDLFGRVDNLFDKEYVGSVIVNESNGRYYEPSPGRN
YGVGMNIAWRFE
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgattgtcagtgccgcaccgcaggtggtttcagaactggataccccagcagcagtaagc
gtggtggatggcgaggagatgcgcctggcaacaccgcgcattaacttgtccgaatcactg
accggcgtgcctggtttgcaggtacaaaaccggcagaactatgcgcaagatttacagctg
tcgattcgcggatttggctcccgctccacttacggtattcgcggtattcgcctgtatgtg
gacggtattcccgccaccatgcccgacgggcaagggcaaacatccaacatcgatttaagc
agtgtgcaaaatgtggaagtgctgcgtggccccttctctgccctgtatggcaacgcgtct
ggtggggtaatgaatgtcaccacccagaccggacaacagccaccaaccattgaagccagt
agttactacggcagttttggcagctggcgctatgggctgaaagcaacgggcgcaacggga
gacggcacacagcctggcgatgtcgattacaccgtctcaaccacgcgttttacgacccac
ggctatcgtgaccatagtggcgcacagaaaaatttagccaatgccaaactgggcgtacgc
attgatgaagccagcaaattaagtctgattttcaatagtgtggatatcaaagcagatgac
ccaggtgggctaaccaaagcagaatggaaggctaatccacaacaagcgcctcgtgcagaa
cagtacgacacgcgaaaaaccatcaagcaaactcaggctgggttgcgctatgagcgtagc
ctgagttcgcgggatgatatgagtgtgatgatgtatgccggagagcgagaaacgacccag
taccagtcaatacccatggcaccacaacttaacccgtcacatgcgggcggcgtgattacc
ctgcaacgccattaccagggaatagacagccgctggacacaccgtggtgaactgggcgtt
ccggtcacgttcactaccggcctgaactacgaaaacatgagtgaaaaccgcaagggctac
aataacttccgcctgaatagcggcatgccggagtacgggcaaaaaggtgagttgcgtcgc
gacgaacgcaatctgatgtggaacatcgatccctatttacagacgcagtggcagctgagc
gaaaaactgtcgctggatgctggcgtgcgctacagctccgtgtggtttgattccaacgac
cattacgttactccgggtaacggcgatgacagcggtgatgccagttatcataaatggcta
cctgccggttcgttaaaatatgcaatgaccgatgcctggaatatctatctggcagccggg
cgaggttttgaaacgccgacgattaatgagctgtcttatcgtgctgatgggcaaagcggt
atgaacttaggtttaaaaccatccaccaacgatacaattgagatcggcagtaaaacgcgt
attggtgatgggctgcttagtctcgcattgtttcagaccgacactgatgatgaaattgtt
gtcgatagcagtagcggtgggcgtacgacttacaaaaatgccggaaagacccgtcgtcaa
ggcgctgaactggcatgggatcaacgtttcgcaggagattttcgcgtaaacgcgtcctgg
acctggcttgatgcgacctatcgcagcaatgtttgcaatgaacaggattgtaacggtaat
cggatgccagggatcgcccgtaatatgggctttgcgtcgataggttatgtaccggaagat
ggttggtatgcaggcacggaagcgcgttatatgggcgatattatggcagatgatgaaaat
acggcaaaagcgccgtcttatactctcgtcggcttattcaccgggtataaatacaattac
cacaatttaactgtggatttatttggtcgtgtcgataatttattcgataaagaatacgtt
ggttctgtcattgtcaatgagtcaaacgggcgatattacgaaccttcgcccggacgaaat
tatggtgtcggcatgaatattgcgtggagatttgagtaa
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