Enterococcus faecalis D32: EFD32_2526
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Entry
EFD32_2526 CDS
T02172
Name
(GenBank) metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
efd
Enterococcus faecalis D32
Pathway
efd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EFD32_2526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efd03019
]
EFD32_2526
Messenger RNA biogenesis [BR:
efd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EFD32_2526
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
DUF4453
Motif
Other DBs
NCBI-ProteinID:
AFO45408
LinkDB
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Position
2574063..2575748
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AA seq
561 aa
AA seq
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MKVNIKNNETGVFAIGGLGEIGKNTYGVQFQDEIIIIDAGIKFPEDDLLGIDYVIPDYSY
IVQNLHKVKALVITHGHEDHIGGVPYLLRQANIPIYAGPLALALITNKLDEHGLLREAEL
HEINEDTVIRFRKTAISFFRTTHSIPDALGVVVKTPSGNIVATGDFKFDFTPVGEPANLH
RMAKLGEEGVLCLLSDSTNAEIPTFTKSEKTIGTSILKIFEKIDGRIIFASFASNIFRLQ
QAADAAVKTGRKIAVFGRSMENAIVNGERLGYIKVPKGTFVDAAELNQLPANETMILCTG
SQGEPMAALSRIANGTHRQISIQPGDTVVFSSSPIPGNTTSVNRLINLLSEAGAEVIHGK
INNIHTSGHGGQEEQKLMLRLMKPKYFMPVHGEFRMLKIHASLAQDTGVPEENCFIMGNG
DVLALTADSARPAGHFNANDVYVDGNGVGDIGNVVLRDRRILSEEGLVLAVATVDIKNKE
IMAGPDILSRGFVYMRESGDMIHEGQRLLFNALREAMKDKNCTEAKLGEAMTTALQPFLF
EQTERHPMILPMIMTATVSDQ
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaaacataaaaaataacgaaactggcgtttttgcaatcggtggtttaggcgaa
attggaaaaaacacatatggggtacaattccaagatgaaattatcattattgatgctggg
atcaaattcccagaagatgatttacttgggattgactacgtgattccagattatagctac
atcgttcaaaatttgcataaagtcaaagcactcgttattacccacggtcatgaagaccat
attggtggcgttccttatcttttacgtcaagcgaatatcccaatctatgcgggaccacta
gccttggctttaattaccaacaaactagatgaacatggtttattgcgagaagcggaatta
cacgaaattaatgaagatacggtgattcgttttagaaaaacagcgattagttttttccgg
acgactcacagtattcctgatgccttgggcgttgtggttaaaacgccttctggtaacatt
gtcgcaacaggtgactttaagtttgactttacacccgttggtgagccagccaacttacac
agaatggcgaaattaggtgaagaaggcgtcctttgtcttctttcagacagtaccaatgct
gaaatacccacctttacaaaatccgaaaaaacaattgggacctctattttaaaaatcttt
gaaaaaattgatggtcggattatctttgccagttttgcttcaaacattttccgtttacaa
caagctgctgatgcagccgtgaaaacaggtcgcaaaattgctgtttttggtcgtagcatg
gaaaatgccattgtcaatggcgaacgcttaggctacatcaaagtgccaaaaggaacgttt
gtcgatgcggcggaactgaatcaattgccagcaaatgaaacaatgattttatgtactggc
tctcaaggagaacctatggccgcgcttagtcggattgctaacggtacacatcgccaaatt
agtattcaaccaggcgatacggttgttttctcaagttcaccaattcctgggaatacgaca
agcgttaaccgtttaatcaacttattatctgaagccggtgcagaagttatccacggaaaa
atcaataatatccatacttctggtcacggtggacaagaagagcaaaaattaatgcttcgt
ttgatgaagcctaaatatttcatgcctgttcatggtgaatttagaatgttaaaaatccat
gcttcgctcgctcaagatacaggggttcctgaagaaaattgctttatcatgggcaacggc
gatgtcttagctttaacggctgatagcgcacgtcctgctggtcacttcaacgctaacgac
gtgtacgttgatggaaatggtgtcggtgatatcgggaatgttgttttacgggatcgtcgt
atcttatctgaagaaggtttagttttagcggtagcaacggttgatattaaaaataaagaa
attatggctggtccagacattctttcccgtggttttgtctacatgcgtgagtctggtgat
atgattcatgaaggccaacgtcttttattcaatgctctacgtgaagcaatgaaagataaa
aactgtaccgaagcaaaattaggcgaagccatgacgaccgctttacagcctttcttgttt
gaacaaacagaacgtcatccaatgattctgccaatgattatgactgccacagttagtgat
caataa
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