Escherichia fergusonii: EFER_3971
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Entry
EFER_3971 CDS
T00811
Symbol
dsdC
Name
(GenBank) DNA-binding transcriptional dual regulator
KO
K13636
LysR family transcriptional regulator, D-serine deaminase activator
Organism
efe
Escherichia fergusonii
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efe03000
]
EFER_3971 (dsdC)
Transcription factors [BR:
efe03000
]
Prokaryotic type
Helix-turn-helix
LysR family
EFER_3971 (dsdC)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_24
HTH_AsnC-type
HTH_20
HTH_5
Motif
Other DBs
NCBI-ProteinID:
CAQ91405
UniProt:
B7LK18
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All DBs
Position
complement(4075273..4076205)
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AA seq
310 aa
AA seq
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MIMEPLREIRNRLLNGWQLSKLHTFEVAARHQSFALAAEELSLSPSAVSHRINQLEEELG
IQLFVRSHRKVELTHEGKRVYWALKSSLDTLNQEILDIKNQELSGTLTLYSRPSIAQCWL
VPALGDFTRRYPSISLIVLTGNDNVNLQRAGIDLAIYFDDAPSAQLTHHFLMDEEILPVC
SPEYAQRHALTNTVINLRHCTLLHDRQAWSNDSGTDEWHSWAQHYAVNLPTSSGIGFDRS
DLAVIAAMNHIGIAMGRKRLVQKRLASGELVAPFGDMTVKCHQHYYITTLPGRQWPKIEA
FITWLKEQVR
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
gtgattatggaaccccttcgtgaaataagaaatcgactgcttaatggctggcaactatca
aaactgcatacttttgaagtggcagccaggcatcagtccttcgccctggcggcagaggaa
ttgtcgctgagccctagtgcggtaagtcaccgtatcaatcagctggaagaagaattgggt
attcagttgtttgtccgttcccatcgcaaagtggaattaacgcacgaggggaaacgcgtt
tattgggcgctaaaatcgtcgctggataccctgaaccaggaaattcttgatatcaaaaat
caggaattatcgggaacgttaactctgtattcccgcccctctatcgctcaatgctggttg
gtgcccgcattaggtgactttacacgccgctatccgtctatttcgctcatcgtgctcact
ggtaatgacaatgtcaatttgcaacgtgccggaatcgatttggcgatttactttgatgac
gcgccgtcagcgcaactgactcatcactttctgatggatgaagaaatcctgcctgtatgt
agcccggaatacgctcaaagacatgctttaaccaacacggtaattaacctgcgccactgt
acgttgctccatgacagacaggcatggagcaacgactccggtacggatgaatggcatagt
tgggcgcaacattatgcagttaatttgccgacatcttctggaattggctttgatcgttct
gatttagctgttatcgctgcgatgaatcatattgggatagcgatgggaagaaagcgcctg
gtacaaaaaaggcttgccagtggtgagctcgttgcaccgtttggcgatatgacggtgaaa
tgccatcagcattattacatcaccacattaccgggcaggcagtggccaaaaattgaggca
tttattacctggctaaaagaacaggtaaggtag
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