KEGG   Enterococcus faecium DO: HMPREF0351_12069
Entry
HMPREF0351_12069  CDS       T02120                                 
Symbol
rpoN
Name
(GenBank) DNA-directed RNA polymerase sigma subunit RpoN
  KO
K03092  RNA polymerase sigma-54 factor
Organism
efu  Enterococcus faecium DO
Pathway
efu02020  Two-component system
efu02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:efu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HMPREF0351_12069 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    HMPREF0351_12069 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:efu03021]
    HMPREF0351_12069 (rpoN)
Transcription machinery [BR:efu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HMPREF0351_12069 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_23 Sigma70_r4 HTH_3 LacI HTH_Tnp_ISL3 DUF2661 HTH_IclR
Other DBs
NCBI-ProteinID: AFK59693
UniProt: I3U3V5
LinkDB
Position
complement(2016968..2018302)
AA seq 444 aa
MKFEQNFSQKQQQTQKLAMTQQLQQSIQVLQYNSEELLAFVENQAMENPLVEVVEPEWQP
DYIKASSSSYEGEETNYLNQIPDTKGSLFDSLIEQVHLNYRDTFLRKIVLYLVEYIDLNG
FLTISLEEAGKEIGATPIQMLDALTLIQQLEPAGVGARSLQECLMLQTERDDYAPELAYI
VLEECFEELVERKWKEIAQRFSVDLHAVQQIFDYLQTLSPSPGRIFDRSSELYIIPDVRV
LVDDDKNVQVISNRKNQPNIRFQESYFKQMSQQADKETENYLKERKQEFEWLKKTILQRG
DTILRVAQVIVSRQKAFFIDKERPIKPLTLKEVATEIDVHESTVSRAVNGKYLETDFGVF
ELKKFFTTRIPTNSTEQTEDLSADTAKKKLQELVDQEDKNKPLSDQKLVELLKKDEIAIS
RRTVAKYRDLLGIPSSSKRKRYDN
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgaaatttgagcaaaatttttcacaaaaacagcagcagacacagaaactagccatgacg
caacagttgcaacagtccatccaagttttacaatataacagtgaggagctgttggcattc
gttgagaatcaagcaatggaaaatccattggtggaagttgttgagccggaatggcagcca
gattacataaaagcttcttcatcttcttatgaaggagaagagacaaattacctaaatcag
attcctgatacaaaagggtctttatttgattcattgatcgaacaagtccatttgaattac
cgagatacttttttgaggaaaatcgttctttatcttgtagaatacatcgatttgaacgga
tttttgacgattagtttagaagaagccggaaaagagattggagctacgcctatccaaatg
ctcgatgcgttgactctgattcagcaattagaaccagctggagtaggtgcacgtagtttg
caagaatgtctcatgcttcaaacagaacgagatgattatgcgccggaattagcttatatc
gtgttggaagaatgttttgaggaactggtggagcgaaaatggaaagaaatcgcacaacgt
ttttctgttgatctacatgctgttcagcagatattcgactatttacaaacgttgagtcca
agccctggccggattttcgaccgtagcagcgaattgtacattattcctgatgtccgggta
ttagtggacgacgataaaaatgtacaagttatctcaaaccgaaaaaatcagccaaatata
cgctttcaagagagttacttcaaacaaatgtcacaacaagcagataaagaaactgaaaat
tatttaaaagaacggaaacaggaattcgaatggttgaagaaaacgatcctccaacgtggg
gatacaattttgcgggttgctcaagtcattgtttcccggcaaaaagctttctttatcgac
aaggaacgtccaatcaagcctcttacgttaaaggaagttgcaactgagatagatgtgcat
gaatccacggtcagtcgtgcagtcaacgggaaatatttggaaacagatttcggtgtattt
gaattaaaaaaatttttcactacacgaattcctacgaatagtacagaacagacagaagac
ctttcagcagatacagcgaagaaaaagctgcaggaattagtcgatcaagaagacaaaaac
aagccgttgtcggaccagaaattggttgaattgctgaaaaaagatgagatagcgatctca
agacgaacagtagcaaaatatcgtgatttattaggaatcccgagttcatcaaaaagaaaa
cgttatgataactaa

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