Duffyella gerundensis: EM595_0201
Help
Entry
EM595_0201 CDS
T04258
Symbol
ydcJ
Name
(GenBank) putative protein YdcJ
KO
K25986
2-oxoadipate dioxygenase/decarboxylase [EC:
1.13.11.93
]
Organism
ege
Duffyella gerundensis
Pathway
ege00310
Lysine degradation
ege01100
Metabolic pathways
ege01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
EM595_0201 (ydcJ)
Enzymes [BR:
ege01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.93 2-oxoadipate dioxygenase/decarboxylase
EM595_0201 (ydcJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1338
DUF1338_N
Motif
Other DBs
NCBI-ProteinID:
CUU22438
UniProt:
A0A0U5L0S0
LinkDB
All DBs
Position
1:217537..218835
Genome browser
AA seq
432 aa
AA seq
DB search
MNSHSVSPDSIRDAFSKAMSAMYQQEVPQYGTLLQIVCEVNAHYLQQYPDTFTPDNPLAV
NRLEVERHGAIRLGSAAELATMRRLFAVMGMYPVSYYDLSAAGVPVHSTAFRAVDEAALL
YNPFRVFTSLLRLDLIDDLSLREQASQILAQRDIFSPRTRALIAVAERDGGLTAAQAEEF
VSEALKTFKWHSDAQVDLATYEALLNHHRLIADVVSFKGPHINHLTPRTLDIDRVQACMP
DYHITPKEVIEGPPRRQVPILLRQTSFKALSETITFTDAAAGKHTARFGEIEQRGLALTP
AGRALYDRLLQDDADFSAFPDDIAAIRQQQLGYFRYTLQPGATVPAGATIAQLESLIDTD
VVRVTPIIYEDFLPVSAAGIFQSNLGSERGKVSKGNPNKQAFEQALGCAVLDEFTLYQQI
EDRSLAALFAAR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgcactctgtttctcccgatagcatccgcgacgctttctcaaaggcgatgtcg
gccatgtatcagcaggaggtgccgcaatatggcacgttgctgcagatcgtctgtgaggtg
aacgcgcactatcttcagcagtatcccgatacctttacgccggacaatccgctggcggtt
aaccggctggaggtggagcgtcacggggccattcgccttggcagcgccgccgagctggcg
accatgcggcggctgtttgccgtcatgggcatgtatccggtgagctactatgacctctcc
gcggcgggcgtaccggtgcactccactgcgtttcgcgccgtggatgaagcggcgttgttg
tacaatccgtttcgcgtgtttacctcgctgttgcggctggatctgatcgacgatctgtcg
ctgcgcgaacaggcgagccagattctggcgcagcgcgatattttcagcccgcgtacccgc
gcgttgatcgccgtggcagagcgcgacggcgggctaaccgctgcgcaggcagaagaattt
gtctccgaggcgctgaaaacctttaagtggcacagcgatgcgcaggtcgatctggcaacc
tacgaggcgttgctcaatcatcaccggctgattgccgacgtggtgagcttcaaagggccg
cacatcaaccatctgacgccgcgcacgctggatatcgaccgtgtgcaggcgtgcatgccc
gattatcacatcacgccgaaagaggtgattgaaggtccgccgcgccgtcaggtgcccatc
ctgctgcggcaaaccagctttaaagcgctgagcgagacaatcacctttaccgacgccgct
gcaggtaaacacaccgcgcgctttggcgagattgagcagcgcgggctggcgctgacgccc
gccgggcgtgcgctctacgatcggttgctgcaggatgatgccgatttcagcgccttcccg
gacgacattgccgccattcgccagcagcagctcggctatttccgctatacgctgcagccg
ggcgccacggtgcctgccggtgccacgatcgcgcagcttgaatcgctgatcgacacagat
gtggtgcgcgtgacgccgattatctatgaggattttttgccggtcagcgccgccggtatt
tttcagtcgaacctcggcagcgagcgcggcaaagtcagcaagggcaacccgaataaacag
gcgtttgagcaggcgctgggctgcgcggtgctggatgaatttacgctctatcagcagatc
gaggatcgctcgcttgccgcgctgtttgccgcgagataa
DBGET
integrated database retrieval system
