Duffyella gerundensis: EM595_1999
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Entry
EM595_1999 CDS
T04258
Symbol
xthA
Name
(GenBank) exonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ege
Duffyella gerundensis
Pathway
ege03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EM595_1999 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ege03400
]
EM595_1999 (xthA)
Enzymes [BR:
ege01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
EM595_1999 (xthA)
DNA repair and recombination proteins [BR:
ege03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
EM595_1999 (xthA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
CUU24233
UniProt:
A0A0U5L0K5
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All DBs
Position
1:2127404..2128219
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AA seq
271 aa
AA seq
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MATEMKFVSFNINGLRARPHQLAALVEQHQPDVIGLQETKVHDDMFPLEEVSKLGYHVFY
HGQKGHYGVALLTKTAPTEVRYGFPGDEEDAQRRLIMADIPSPLGDITVINGYFPQGESR
DHPTKFPAKARFYRDLQDYLQAQPMDKPILVMGDMNISATDLDIGIGEESRKRWLRTGKC
SFLPEEREWMDRLLGWGLVDTWRLQHPEDNEQFSWFDYRSKGFDDNRGLRIDLLLASQPL
AERLAETGIDYQIRAMEKPSDHAPVWASFTL
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgaaatgaaatttgtttcttttaacatcaatgggctgcgcgcgcgtcctcat
caactggccgcgttggttgaacagcaccagcctgacgtcatcggcctgcaggaaacaaaa
gtccatgacgatatgtttccgcttgaagaggtcagtaagctgggctatcacgttttttat
cacggccagaaaggccattatggcgtggcgctgctgactaaaaccgcccccaccgaggtg
cgttatggttttcccggcgatgaagaagacgcgcagcgtcggctgatcatggccgacatc
ccgagcccgctgggcgacatcacggtgattaacggctatttcccccaaggcgaaagccgc
gaccatcccaccaagtttcccgccaaggcgcgcttttatcgcgatttacaggattatctg
caggcgcagccaatggataagcccatcctggtgatgggtgatatgaacatcagcgcaacc
gatctggatattggcattggtgaagagagccgcaaacgctggctgcgaaccggcaaatgt
tcatttttaccggaagagcgtgaatggatggatcggctgctgggctgggggctggtcgat
acctggcgcctgcagcatcctgaagataacgagcagttctcgtggtttgactaccgttcc
aaagggtttgatgacaatcgcggattgcgcatcgacctgctgctggccagccagccactg
gcggaacgccttgctgaaaccggcatcgattatcagatccgtgcgatggagaagccctcc
gatcatgcgccggtctgggccagctttacgctgtaa
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