Eucalyptus grandis (rose gum): 104432692
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Entry
104432692 CDS
T03547
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03013
Nucleocytoplasmic transport
egr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104432692
03015 mRNA surveillance pathway
104432692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104432692
03041 Spliceosome [BR:
egr03041
]
104432692
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104432692
Spliceosome [BR:
egr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
104432692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
104432692
NCBI-ProteinID:
XP_039163682
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Position
2:complement(38728951..38736118)
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AA seq
877 aa
AA seq
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MSGGFFRGTSADQDTRFSNKQAKLLKTQKFAPELEFLVDMTKVKMDVMKPWIATRVTGLL
GFEDEVLINFIYGLLDGKEVNGKEVQIQLTGFMEKNTGKFMKELWTLLISAQKNASGVPQ
QFLDAKEEETRKKKVEADLVADEIRKKRDKESREFEQEKSERMDGVVEMKASNDDLEKDF
MSSRASNARRDGKNDNGRRGASRRSHEVSRSPRSVDHSSSSPRASPSRSISKSLSKSRSY
SDERRRSRSISASRQRRSRSISSSKVYRSPRRRSMTPRRRYSPRRSRSPRRGASFYRRRS
ISPPHRRSPSPVRRRLRSPPRHRSRSPMKRRSPPPVRRRRSPSPVRRRRSPSPVRRGSPS
FDRRRSPPPVRHRSSLVRRRSPSPLRRRSPSPVRRRSPSPVRRRSPFPRHRSPSPRRHIS
PSPVSRGLSSPVRHLSTSPMQPRSSSPVHHGTPSPVPERLRRSQSIPGQRSSSPGRRRSP
LSARRKSMTPPPRRTSHESDSASPIGHRSPPLRKRSSPFGRSPAGSTRERMRSRSPYESP
VKQARNVRRRSRSSSPYRSPLKNLVNNDDRSNSLRLRERRSHQGSPDKSDERGITNNIRE
SRDRALKPRDKRSINSSSFSKQGDSPMKLRDKDNSPPEKAAGDRSNGSKSRSDGLDIRNK
DQERMREKPSGKGLLSPSLNKESGEKLQTSHSVEGRKSGDKDHSRDSVRRHRSEVTQRSV
EKVDHSKHSSLSETGSEESDKHINDRKEKKRRKRLDKREKDSDDNSYDSEIEDRKETKRR
RKEEKKMKKEERRRRREERRRRREERRAEKMRAKKEDIVSSDLGKHSRDASSSDDEDVDR
KEDHSYDEEAETKQKKLEIELRMKALESFKAKKGIGH
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggagggtttttccgaggtacttccgcggatcaggacacgcggttctcgaacaag
caggcgaagctcctcaagacgcagaagttcgctccggagctggagttcctggtggacatg
acgaaagtgaagatggatgtcatgaaaccttggattgccaccagggtgactgggcttcta
gggtttgaagacgaggtcctcatcaatttcatatatggactcctggatgggaaggaggtt
aatggaaaggaggttcagatacaactcacaggatttatggagaaaaacactggcaagttt
atgaaagaactctggactcttcttatcagtgcgcagaaaaatgcaagcggtgtgcctcag
cagttcttagatgccaaagaggaagaaactcggaagaagaaggttgaagccgacctcgtt
gctgatgaaattcggaagaaaagagacaaggaaagtagagaatttgaacaggagaaatca
gagaggatggacggtgtggtagagatgaaggcttcaaatgatgacctggagaaggacttc
atgtcttcaagggcctcaaatgcccgtcgggatggtaaaaatgataatggaaggaggggt
gcttcaagaagaagccatgaagtttctagatctcctcgatcggtggaccattcctcttca
tcccctcgagcttcaccttctaggtcaatcagcaagtcattgtctaaatccaggagctat
tcagatgaaagacgcaggtcaaggagtatctctgcatcacgacagagacgtagccgttca
atttcttctagtaaggtgtatcgttctcctcgaagaaggtctatgacacctcgtcggagg
tattctcctcggagatcccgatctccgagacgaggagcgtctttttataggcggagatcg
atatctcctccgcatcgcaggtcaccatctcctgtaaggcgtaggttgcgttcacctcct
cgacataggtcacgttctccaatgaagcgtagatctccgcctcctgtccggcgtcgaaga
tctccatctcctgtccggcgtcgtagatctccatctcctgtccggcgtgggtcaccttct
tttgatagacgaagatcaccgcctccggtgcgacatagatcttcccttgtccgacgtcga
tcaccctctccattacggaggaggtcgccctctcctgtacggaggaggtcgccctctcct
gttcgaaggaggtcgccctttccaagacacagatcaccatctcccaggcgtcatatatca
ccttcacctgtgtctcgcgggttatcatctcctgtccgtcatttatcaacttcacctatg
cagcccagatcatcatctcctgtacaccatgggaccccatcccctgtaccagagcggcta
cggagatctcaatcaattcctgggcaaagatcttcatccccagggcggcgaagatcgccc
ttatctgcacgcaggaaatcaatgacccctccaccccggaggacatctcatgagtcagac
tctgcatctccgattggtcatagatctccacccttgcggaagagatcttctccatttgga
agatcgcctgctggatctaccagggaaagaatgaggtcacggagcccatatgagagtcct
gtaaagcaagctaggaatgtccggagacgaagcaggtcatctagcccatacaggagtcca
ttaaagaatctggtgaataatgacgaccgttctaattcactgcgattgagagaacgtagg
tcgcatcaaggaagcccagataaaagtgatgagaggggaattactaacaacattcgggaa
agtagggatcgtgctctcaagcctagagataaaagatctataaattcatcctctttcagt
aaacagggagactcgcccatgaagctgcgtgataaggataattctcctcctgaaaaagct
gctggagatcgttctaatggctctaagagccgttctgatggcttggatattcgaaacaaa
gaccaagagagaatgagggaaaagccctctggaaagggattgttgtcaccttcactgaac
aaagaatctggtgagaagctacagacatctcactccgttgaaggtagaaaatctggtgat
aaggatcattctcgagatagtgttcgacggcacagatctgaagtcacacaaagatctgtg
gagaaggttgatcatagtaaacacagcagcttgtctgaaacaggttctgaggaaagtgat
aagcacattaatgatcgcaaggagaagaaaaggcgcaaaagattagataagcgagaaaaa
gattcagatgataatagctatgattctgagatagaggatcggaaggagactaaaaggagg
aggaaagaagagaagaaaatgaagaaggaggagagacgtcgacgtcgagaggagagacgt
cgtagacgggaagaacgtcgtgcagaaaagatgagagcaaagaaagaggatattgtctca
tctgaccttggaaagcattccagagatgcatcctcctcagatgatgaagatgttgacaga
aaggaggatcattcgtatgatgaagaggcagaaaccaagcaaaagaaacttgagattgag
ctacgaatgaaggctcttgagtcatttaaggcaaagaagggcataggtcactga
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