KEGG   Elaeis guineensis (African oil palm): 105039319Help
Entry
105039319         CDS       T03921                                 

Definition
(RefSeq) DNA ligase 4
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:egu00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    105039319
Enzymes [BR:egu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     105039319
DNA repair and recombination proteins [BR:egu03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     105039319
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
2
AA seq 1172 aa AA seqDB search
MTDETVRFGVLGSMFEAMVRDRSAAKKRKRFRTLLDRVYTGRDYFSAVRLILPGLDRERG
SYGLKESALAAALVDALGLAKDSPDALRLINWRKGGARSGANAGNFALVAAEVLQRRQGM
ASGGLTIKELNDALDQIASKENRAEKTAVLASLIKKTNAQEMKWILMIILKDLKLGISEK
SIFHEFHPDAEDLFNVTCDLKLVCEKLKDRSQRHKRQDIEVGKAVRPQLAMRVGDAATAW
RKLHGKHVVVECKFDGDRIQIHKNGEEIHFFSRNFLDHPEYEHGMSNIILQNITVERCIL
DGEMLVWDTSTQRFAEFGSNQEIAKAAREGLESDRQLCYVAFDILYVGDTSVIHQSLTER
LDLLRKVVKPLKGRLEILTPNGGLNDRRLQGEPCWSLVAYTVEDVERFFKETIENRDEGI
VLKDLGSKWEPGDRSGKWLKLKPDYIHAGADLDVLVIGGYFGSGRHGGEVAQFLVGLATR
SDSTSYPNRFVSFCRVGTGLSDEELDALITKLKPYFRKNEYPKKVPPFYEVTNNSKERPD
VWIDSPDKSVILSITSDIRTIKSEVFAAPYSLRFPRIHRVRYDKPWHECLDVQSFVDLVH
SSNGNTQRGTDHGGLQNHGSKRVKSTKKGEKKNLSIVPAHLIHTDISGVKEETLIFANMM
FYFINVPPSYSVDYFHKIVVENGGTFSMNLNDSVTHCIAAERKGIKYQAAMHHGDIIHYS
WVLDCCKQKHLLHLQPKYYLFLADSSKSKFREEIDTFSDYYYWDIDIADIKQIFSNMHGP
EYTNNIDYYKKKYCPVETLCLFQGCCVYFYKSMSVINTCGEVILELALRRMRLEITMHGG
EVCSSLQHATHLIVYSTTKEANNFDEIYKSFPSSQRHLLHDSRLHVVMHQWLEDSLERGK
KLHEDSYNLKPDTFEEIKIDERHNLISPVTTSNAEKQCVSRLNIGEKKKRDRPMHADARK
GRTGPKLTRRTRARIGNRPAKIDADEAENSDCSDETSMGKILKSRKESNIDITESAGIKD
QESFSDESSQRGALGSRKESKGDMEESEDIKYQAPHFSIQAAECHAGSQNVHLTDCDKKS
EAPEDITNERFDNVQTVHVTETGTKGTGEKIEQIVDPLHAMLLDMIPSLSQNNAETGSSI
PEGKETQPDLHTNPVKKKVSYKDVAGQLLKDW
NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt
atgacagatgagacggtaagattcggggttctgggcagtatgttcgaggcgatggtgagg
gatcggtcggcggcgaagaaacggaagcggttcaggacgctgctggatcgggtgtacacg
gggcgggactactttagcgccgttcggctcatcctcccgggcctcgaccgggagcgcggc
tcgtacgggctcaaggagtccgccctcgctgccgcccttgtcgacgccctcggactggcc
aaggactctcccgacgccctccgccttatcaactggcgcaagggcggcgcccgttcgggt
gccaacgccggcaacttcgcccttgtcgccgccgaggttctacagcgtaggcaaggaatg
gcttctggtgggcttacaatcaaggagttgaatgatgctcttgatcaaatagcctcaaaa
gaaaatagggcagagaagactgctgttcttgctagtctcattaagaaaacaaatgcccag
gaaatgaagtggattctaatgatcattcttaaagatctgaagctggggattagtgagaag
agtatatttcatgagtttcacccagatgctgaagatttgttcaatgtcacttgtgaccta
aaattagtctgtgaaaagctgaaagatcgaagtcaacgtcataaacggcaggatatagaa
gtgggaaaagctgtaaggcctcagctagctatgagggtcggtgatgctgcaactgcatgg
aggaagcttcatggaaagcatgtggttgtcgagtgcaagtttgatggtgatcgcattcaa
atccacaagaacggagaagagattcactttttttcacggaattttctcgatcatcccgaa
tacgaacatggcatgtcgaacattattttacagaacatcactgttgagaggtgtattctg
gatggtgaaatgctcgtttgggacacctcaactcaacgttttgcagaatttggttcaaat
caggaaatagcaaaggcagctagagaaggattagagagtgaccgccagctatgctatgtt
gcatttgatattctttatgtcggagacactagtgttattcatcagagcttgacagaaaga
cttgaccttctgcgaaaagttgtaaaacctttgaagggtcgcttagaaattctgacccct
aatgggggtcttaatgatcgtcgtttgcaaggcgagccatgttggtcccttgttgcttac
actgtggaagatgtggagagatttttcaaagaaactattgaaaatagagatgaggggatt
gtgttgaaggaccttggttccaaatgggaacctggtgatcgaagtggaaagtggttgaag
ttgaaacctgattacatacatgctggtgctgatctggatgtgcttgtcataggaggatat
tttggttctggccgtcatggaggagaggtagctcagtttttggtgggtcttgcgacgcgt
tcagattctaccagctatccaaaccgatttgtttcattctgtcgagttggtactggtctc
tctgacgaggagcttgatgctctcattacgaaattgaagccttatttcaggaagaatgaa
tatccaaaaaaagtgccacccttttatgaagtcacaaataattcaaaggagaggccagat
gtttggattgacagccctgacaaatcggtcatactttctataactagcgatatccgaact
ataaagtctgaggtatttgccgcaccatacagtttgagatttccacgcattcatcgtgtg
agatatgacaagccatggcatgagtgccttgatgtgcagtcattcgtagacttggtacat
tcaagcaatgggaatacacagaggggaacagatcatggaggtctgcaaaatcatggatca
aaacgtgtgaagtccaccaagaagggagagaagaaaaatttatccattgtccctgctcat
ttgatccatactgacatctctggtgttaaggaggagaccctcatatttgcaaatatgatg
ttctattttatcaatgttcctccatcctattctgtagactactttcacaaaattgtggtt
gagaatgggggaactttctcaatgaatctcaatgactcagttactcactgcattgcagct
gaaagaaaagggatcaagtatcaagctgctatgcatcatggagatatcattcactattct
tgggtcttggattgttgcaaacaaaagcatcttctacatttgcaaccgaagtactaccta
tttcttgcagattcttcaaagagcaagtttcgggaggagattgacacgttctctgattat
tattactgggatatagatattgcagacattaaacagatattcagcaatatgcatggacca
gaatatacgaacaacatagattattataagaagaagtactgtccagtggaaacattgtgc
ttgtttcagggttgttgtgtttacttctacaaatcaatgtctgttataaatacatgcggt
gaagtaatattagagcttgctttaaggaggatgaggcttgaaataaccatgcatggtggt
gaagtttgcagcagtcttcaacatgccactcatttgattgtgtattcaacaacaaaagaa
gccaacaactttgatgaaatatataaaagttttccatcttctcaaagacacctactacat
gacagtaggctacatgttgtgatgcatcaatggttggaagattcattagaaagaggcaag
aagttgcacgaagattcttataacttgaagcctgatacctttgaagaaattaagattgat
gagaggcacaatctcatatctcctgtaactacaagcaatgcagaaaaacagtgtgtctct
agactaaatataggtgaaaagaagaaaagagataggcccatgcatgctgatgcaagaaag
ggtagaacgggtccaaaactcacacgaagaacacgggcaaggattggaaacagacctgca
aaaatagatgcagatgaagcagagaacagtgattgctcagatgaaacttctatgggtaaa
atcctgaagtcaagaaaagagtctaacattgacatcacagaaagtgcagggatcaaagat
caagaatcattttcagatgaaagtagtcaaagaggagccttaggatcaaggaaagagtct
aaaggtgacatggaggaaagtgaggatatcaaatatcaagcaccgcattttagtattcaa
gcagctgagtgtcatgcagggtctcagaatgtacatttaactgattgtgataaaaagtca
gaagcaccagaagatataaccaatgaaaggtttgacaatgtgcaaacagtgcatgtcaca
gaaacaggaactaaaggaactggtgaaaaaattgaacaaattgttgacccactgcatgct
atgttattagatatgataccaagtcttagccagaacaatgcggaaactggaagctccatt
cctgaaggcaaggaaacacagccagatctccacaccaacccagtgaagaagaaagttagc
tacaaagatgttgcaggtcaactcctcaaagattggtaa

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