Ethanoligenens harbinense: Ethha_0208
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Entry
Ethha_0208 CDS
T01384
Name
(GenBank) metal dependent phosphohydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
eha
Ethanoligenens harbinense
Pathway
eha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ethha_0208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eha03019
]
Ethha_0208
Messenger RNA biogenesis [BR:
eha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Ethha_0208
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GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
DUF6479
HDOD
KH_2
DUF6779
ATP-synt_B
KhpA-B_KH
V-ATPase_G
Vpu
PA26
Motif
Other DBs
NCBI-ProteinID:
ADU25795
UniProt:
E6U6R2
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Position
complement(219806..221365)
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AA seq
519 aa
AA seq
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MSGMGTIEVVIAVILIVVCAVVGFFLGIAYRRRIAEAEIKSAEDEARRIVGDALKEAENK
KKEALLEAKDEMHKLRADAEKEIRDRRSEVTRQERRLIQKEESIDRKLEQLEQKDETLNK
RNKAAQERLDEAEAVKSQQLETLERISGFTTEQAKDYLLSRLENELAYEKSVRVKDYEQQ
LKDESDARAREIITTAVQRCAADHVAEATVSVVPLPNDEMKGRIIGREGRNIRTLETLTG
VDLIIDDTPEAITLSSFDPVRREVARIALERLITDGRIHPARIEEMVEKAKKEVENTIRQ
EGEQAIIEMGIHGMHHELVKLLGRLRYRTSYGQNVLNHSLEVAQLAGFMAAELHADATTA
RRAGLLHDIGKSVDREVEGSHVDIGVDIAKKYKEHADIIHAIEAHHGDVEARTVVACLVQ
AADAISAARPGARRENLENYIHRLEKLETIANSFEGVEKSFAIQAGREVRIMVRPEALDD
RQIVLVARDIVAKIEHEMEYPGQIKVHVIRESRAIEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
ttgagcggcatgggtacgatagaggtcgtcattgccgtcattctgatcgttgtgtgcgcg
gtggtgggcttttttctgggaattgcctaccgcaggcggattgcggaagcggaaattaaa
tcggccgaagatgaagcacgtcggattgtcggtgacgcactgaaagaagcggaaaacaag
aaaaaagaagcgctgctcgaggccaaggatgagatgcacaagttgcgcgccgacgcggaa
aaagagatccgtgatcgtcgctccgaagtgaccaggcaggaacgccgcctgatccagaaa
gaggaatccatcgaccgcaaactggagcaactggaacaaaaggacgagaccctcaacaaa
cgtaataaggccgcccaggagcggctggacgaagcagaagccgtcaagagccagcagctt
gaaacactggagcgcatttccgggttcaccaccgagcaggccaaagactacctactcagt
cggctggaaaacgaactggcgtatgaaaagtcggtgcgcgtcaaagactatgagcagcag
ctgaaagacgagtcggacgcgcgcgcacgggagatcatcaccaccgccgtgcagcgctgc
gccgcagaccatgtggccgaagccaccgtttcggtggtgccgctgcccaacgatgagatg
aaaggccgcatcatcggccgcgaggggcgtaacatccgcacgctggagaccctgaccggt
gtggatctcatcatcgacgacacgccggaggccatcacgctttccagcttcgatccggtg
cgccgcgaagtcgcgcgcatcgcgctcgaacgcctgattaccgatggacgcatccatccc
gcgcgcatcgaggaaatggtcgaaaaggccaaaaaagaagtggagaacaccatccgtcag
gaaggtgaacaggccattatcgagatgggcatccacggcatgcaccacgaactggtcaaa
ctgcttgggcgactgcgttaccgtaccagctacggccagaacgttctcaaccattcgctg
gaggtcgcgcagcttgcgggcttcatggcggcggagctgcatgcagacgccaccacggct
cgccgcgccggtctgttgcatgatatcggtaagtcggtcgaccgcgaggtcgagggttcc
catgtggacattggcgtcgatatcgccaaaaaatacaaggaacatgcggatattatccat
gccattgaagcgcatcacggcgatgtggaagcgcgcacggtggtcgcctgcctggtgcag
gccgccgatgccatctcggccgcgcgaccgggcgcacggcgtgaaaacctcgagaactat
atccaccggttggagaagcttgagaccatcgccaattcgtttgagggcgtggaaaaatca
ttcgccattcaggcggggcgcgaagtacgcatcatggtgcggccggaagcactggacgat
cgccagatcgtgctggttgcccgcgatatcgtggccaaaatcgagcacgagatggaatat
cccggccagatcaaggttcacgttatccgtgagagccgtgccatcgagtatgccaaatga
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