KEGG   Entamoeba histolytica: EHI_079960
Entry
EHI_079960        CDS       T00238                                 
Symbol
102.t00005
Name
(RefSeq) hypothetical protein
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
ehi  Entamoeba histolytica
Pathway
ehi03440  Homologous recombination
ehi03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ehi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    EHI_079960 (102.t00005)
   03450 Non-homologous end-joining
    EHI_079960 (102.t00005)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ehi03032]
    EHI_079960 (102.t00005)
   03400 DNA repair and recombination proteins [BR:ehi03400]
    EHI_079960 (102.t00005)
DNA replication proteins [BR:ehi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    EHI_079960 (102.t00005)
DNA repair and recombination proteins [BR:ehi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     EHI_079960 (102.t00005)
    BRCA1-C complex
     EHI_079960 (102.t00005)
   NHEJ (non-homologous end-joining)
    MRX complex
     EHI_079960 (102.t00005)
SSDB
Motif
Pfam: AAA_23 SMC_N AAA_21 SbcC_Walker_B AAA_29 AAA_19 AAA_16 ABC_tran
Other DBs
NCBI-GeneID: 3407194
NCBI-ProteinID: XP_652875
UniProt: C4M2L7
LinkDB
AA seq 1241 aa
MTTFDKLEIAGIRSINPDKPVEIEFFKPLTLITGPNGAGKTTIIESVRYACTGTSPPNSN
GGKLFVRDPTMSATKKTDAYINLSLDTSKGKLTISRKLGVSINLGKTKFSAKEAKLELDG
QKHDINDGTLTSTIETSAVMLDSVLFCHQEDSFWPFEEPKKLKEKFDDVFGTSNYTKFLD
DVSKLQKSCKERSKETELRFVKVSEDYNKLKRDQNEIQKSQHDIDEKKMIKSQKLQEKEL
KTKEIESLNSQLGDLQKESRRKENYMAQIKRYKDELQNFNRIPSNNRDQLDHLITSLNEE
IKKLETQSIDVQQKVNKEGQHQELSKQIHNQMKDQTLLENDLKNRRELEKEINEKIQGVE
SVEEKVNNEKIKNEEKQKEIEEEKKKEEKELEDMSKEVNEIKNELENRKYNVHIKQDDVN
NKTTENERKKKRDQEIQEEINEMKKDIIKKNEEIDDLKKQLSKESFEEKEQKSKIKLEEI
KKDIEEIDNEINRALENIQQQIKIERLMKEINENKTELENFKLTVGKDLQGKEKDIKETI
KKQKNEILSMKNDSEETKRNIVKIEMEIKRLIREKEEKVFQLNKAKKEINELGNKEKNKE
RIIQLREMERGIWTAAEQLVHKAMENGICPVCGNKHIDNEVINERKEEIKKMGRFSQEEK
EELKNLEEIEKKRENNQKIIEENEERVIQIEKELNEMENQLQEQYQCRDDLDSNIERNSN
EIEKQEDLYEQIKEMIKKEEENKRKQEELNEIQTKEQTRSVNELKEIKNQLNLKLKEEEI
CMQTIIKSKEQEKEKLNNIEKKSLNIRGLTQMIDEKEKNWKRTENEIKELERLITTIKEE
IRQENKIIENKEKEVNKRCQEKESRQKNYNERNEKRNKEIKTIQEKLRNISVWETSLKKS
KGVKELEGVFEVNQKKLVNDQCKLKLIEQEIEILRQTSGDVQDKINTKKLKIKEYEEDKK
YIETKECLDSIQNVVESPNYKECEEKIEQTKKEIKSCENIRDKLMNEVSEIEGELKILTN
NILRHKEDINRLNPNGKLETEYDELSIRRIVEKNTIEDLDKYKGAVGRAMTKYHREKMKE
INDIINDLWSGVYAAQDIQTVKIVAEDPNQEGARTTYNYRVDMVKDGIPMEMRGRCSMGQ
KALASVIIRIALAKTFCSKCSVLALDEPTINLDEENCTSLAQQLCSLLESQGKLSNFQII
LITHDENFVKKLSNFNEEFYRIERDNENCSCVKRMSFNGLI
NT seq 3726 nt   +upstreamnt  +downstreamnt
atgacaacttttgataaattggaaattgcaggaattagaagtattaacccagataaacca
gttgaaatagaattctttaaaccattaactttaataactggtccaaatggagcaggaaaa
acaactattatagaatctgtaagatatgcatgtacaggaacttctccaccaaactcaaat
ggaggaaaattatttgttagagacccaacaatgtcagcaacaaaaaagactgacgcatat
atcaacctttcattggatacttcaaaaggaaaattaacaatttcaagaaaattaggagtt
tctattaatcttggaaaaacaaaattttcagcaaaagaagctaaattagaattagatgga
caaaaacatgacataaatgatggaactctcactagtacaattgaaacatcagcagtaatg
ttagactcagttttgttttgtcatcaagaagattcattttggccatttgaagaaccaaaa
aaattaaaagaaaagtttgatgatgtatttggtacaagtaattacactaaattccttgac
gacgtttcaaaacttcaaaaaagttgtaaagaaagatcaaaagaaactgagttaagattt
gttaaagtctcagaagattataataaactaaaaagagaccaaaacgaaattcaaaaaagt
caacatgatattgatgaaaaaaaaatgattaaatctcaaaaacttcaagaaaaagaactt
aaaactaaagaaattgaatcacttaactctcaacttggtgatttacaaaaagaaagtaga
aggaaagaaaattacatggctcaaattaaaaggtataaagatgaacttcaaaattttaat
agaattccttctaataatagagatcaattggatcatttaattacaagtttaaatgaagaa
attaaaaaattagaaacacaaagtattgatgttcaacaaaaagttaataaagaaggacaa
catcaagaattgagtaagcaaattcacaaccaaatgaaagatcaaacgttattagaaaat
gacttaaaaaatagaagagaattagaaaaagaaataaatgaaaagattcaaggagttgaa
agtgttgaagagaaagtgaataatgaaaagataaaaaacgaagaaaaacaaaaagaaatt
gaagaagaaaagaaaaaagaagaaaaagaacttgaagatatgagcaaagaagttaatgaa
ataaaaaatgaacttgaaaataggaagtataatgttcatataaaacaagatgatgttaat
aacaaaactacagaaaatgaaaggaaaaagaaaagggaccaagaaattcaagaagaaatt
aatgaaatgaaaaaagatattattaaaaagaatgaagaaattgatgatttaaaaaaacag
ttgtcaaaagaatcatttgaagaaaaagaacaaaaaagtaaaatcaaattagaggaaatt
aaaaaagatattgaagaaattgataatgaaataaatagggcattagaaaatattcaacaa
caaattaaaatagaaaggttaatgaaagagattaatgaaaataaaacagaattagaaaat
tttaaattaactgttggtaaagatcttcaaggaaaagagaaagatattaaggagacaata
aaaaaacaaaaaaacgaaattttaagtatgaaaaatgatagtgaagaaacaaaacgaaat
attgtaaaaatagaaatggaaattaaacgacttattcgtgaaaaagaagaaaaagtattt
caattaaataaagcaaaaaaagaaattaatgaattaggtaataaagaaaagaataaagaa
cgaattattcaattaagagaaatggaaaggggaatttggacagcagcagaacaattagtt
cataaagcaatggaaaatggaatatgtccagtttgtggaaataaacatattgataatgaa
gttattaatgaaagaaaagaagaaattaaaaaaatgggaagatttagtcaagaagaaaaa
gaagaattaaaaaatctcgaagaaattgaaaagaaaagagaaaataatcagaaaatcatt
gaagaaaatgaggaaagagttatacaaattgaaaaggaattaaatgaaatggagaatcag
ttacaagaacaataccaatgtagagatgatcttgattcaaatatagaaagaaatagtaat
gaaattgaaaaacaagaagatttgtatgaacaaataaaagaaatgattaaaaaagaagaa
gaaaataaaagaaaacaagaagaactgaatgaaattcaaacaaaagaacaaacaaggagt
gttaatgaattaaaggaaattaaaaatcaattaaatttaaaattaaaagaagaagagatt
tgtatgcagacaatcataaaatctaaagaacaagagaaagaaaaattgaataatatagaa
aaaaaaagtttaaatataagaggattaacacaaatgatagatgaaaaagaaaaaaattgg
aaaagaacagaaaatgaaataaaggaattagaaaggttaataactacaataaaagaggaa
attagacaagaaaataaaattatagaaaataaagaaaaagaagttaataaaagatgtcaa
gaaaaagagtctcgacaaaagaactataatgaaagaaatgaaaaaagaaataaagaaata
aaaacaattcaagaaaagctaagaaatatttcagtttgggaaacttcattaaagaagtct
aaaggagtaaaagaattagaaggagtttttgaggtaaatcaaaagaaacttgtgaatgac
caatgtaagttaaaattaatagaacaagaaattgaaatattaagacaaacaagtggggat
gtacaagataaaattaatactaaaaaactaaaaattaaagaatatgaagaagataaaaag
tatattgagactaaagaatgtcttgattcaattcaaaacgttgttgagagtccaaattac
aaagaatgtgaagaaaagatagaacaaacaaaaaaagaaataaagtcctgtgaaaatatt
agagataagttaatgaatgaagttagtgaaattgaaggagaattaaaaatattaacaaac
aacatacttaggcacaaagaagatataaatagacttaatccaaatggaaagttagaaaca
gaatatgatgaattatctattcgaagaattgttgaaaaaaatacaattgaagatttagat
aaatataaaggagcagtaggaagagctatgacaaagtatcatagagagaaaatgaaagaa
attaatgatattattaatgatttatggtcaggtgtatatgcagcccaagacattcaaaca
gttaaaattgttgctgaagaccctaatcaagaaggggcaagaacaacttataactatcga
gttgatatggttaaagatggtattcccatggaaatgagaggaagatgttctatgggtcaa
aaggcattagcctcagtaattattagaattgctcttgctaagacattttgttctaaatgt
tctgttttagcattagatgaaccaacaattaatttagatgaagaaaactgtacatctttg
gcacaacaattatgcagtttacttgaatcacaaggaaagttatcaaatttccagattatc
ttaattacacatgatgagaattttgtaaagaaattatctaattttaatgaagaattttat
cgaatagaacgggataatgaaaattgtagttgtgttaaaagaatgtcattcaacggattg
atttaa

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