Edwardsiella hoshinae: A9798_11345
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Entry
A9798_11345 CDS
T04508
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
eho
Edwardsiella hoshinae
Brite
KEGG Orthology (KO) [BR:
eho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eho03400
]
A9798_11345
DNA repair and recombination proteins [BR:
eho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A9798_11345
Archaeal homologous recombinant proteins
A9798_11345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
ABC_ATPase
MeaB
AAA_15
nSTAND3
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOV97486
LinkDB
All DBs
Position
2546706..2550407
Genome browser
AA seq
1233 aa
AA seq
DB search
MKILSLRFKNLNSLRGEWKIDFNAPPFFDNGLFAITGATGAGKSTLLDAICLALYHQTPR
LGLLSANQNELMTRGTAESLAEVEFEVKGVGYRAFWSQRRANQRPDGKLQPPRAELARLD
DGRILCDKIGDKLKCIAELTGLDFGRFTKSMMLSQGQFAAFLNADAGKRAELLEELTGTE
IYGQLSSAVFEHYKQAKLELDTLRERVAGVDLLNEAQREALQDELKQVQQQERQLQTQLT
QAQQQQAWLRRQQEQQQAVSQAEAQAAQAQHHWQSIQPQLARLAQAEPALRLHPHYQGWT
QAEQDLRHADQRQQQLEQQLQALRCQQAPLQQALQQALDQQQHFRQRRDATQTLISQQVV
PLDQALGKLEEAKAQRAQQCQESHQQQQRLQQQHQQLTAQRQALQHELDTLQRQREATLA
HAQWGERLPRWQLWFEQRATLDADAQRLENARLSQTAQAAELQRQHAERQQALRTLQQAE
QAQRQALNALEAEQQAWRQRHPPEQLAAEHARLQQGDEARQQLIALQPLAQQEIARNAAL
TLQLATLQQAQQQLTQQLAEKRRHYSEKRQHLLDLERQIALQQRILSLEAERARLIDGEP
CPLCGATTHPLAHAGPRPTLDESQQRRDRLSQAVERLGQEGSALSERLRQATAQHRQLSD
EQQQLQQRLTQQRTRWQQLCEALALSVPLDDATALADYLQQCTAQARTLEQLQRQGEALE
QRLRQARDDFTQASVGVSQAQHALGLLAQQHQALTQRQHEQTQQQHTLTQQQDALQQQIA
ADLADCALSVPDAAQSEAWLAARQAERRRWQQDEEREQQLRQQRLTLDEQWRLLQQRLDE
QNQRHQTLTREHQALVEQHHTLQTQRQTLLDGQPVAQVQAELQQQEQAQEQRLSEAQRAS
LNWQQQYERLSGELAAAHQQQQTLSQRHATLHQQWQAALAASPFDDEAAFLAARLSQEAS
QHLTALRDDGQRRCQQSAALLAAARQAWRDGEASRPAALCVSEDDPDLRHRCAELGQRLR
QLGLHQGELQQQLHSDSQRRLSLQSWLDEIAQRERTYQEWSYLNQLIGSSSGDKFRKFAQ
GLTLDHLVYLANRQLMRLHGRYQLQRRAGDTLELEVVDTWQADARRDTRTLSGGESFLVS
LALALALSDLVSHKTRIDSLFLDEGFGTLDAETLDTALDALDTLNASGKTIGVISHIDAM
KERIPLQIRVKKINGLGFSRLDSRYRVGDGEAD
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctgagtctacgctttaaaaacctcaactccctgcgcggcgaatggaagatc
gatttcaacgccccgccattcttcgacaacggtctgttcgccatcaccggggccaccggc
gccggaaagagcaccctgctcgacgccatctgcctggcgctgtatcaccagacgccccgt
ctgggcctcctctccgccaaccagaatgaattgatgacacgcggtaccgccgagtcgctg
gccgaagtcgagttcgaggtcaagggcgtcggctatcgtgctttctggagtcagcgccgc
gctaatcagcgcccggatggcaagttacaaccaccgcgggccgagctggcgcgcctggat
gatgggcgcattctgtgcgacaagatcggtgacaagctgaagtgcatcgctgaactgacc
ggcctggactttggccgcttcaccaagtcgatgatgctgtctcaagggcagttcgccgcc
tttctcaatgccgacgcgggcaaacgcgccgagctgttggaagagctgaccggtaccgag
atctacggccaactctccagcgccgtctttgagcactataaacaggccaagcttgagctc
gatacgctgcgcgagcgggtcgcgggtgtcgacctgctcaacgaggcacaacgcgaagcg
ctacaagacgagcttaagcaggtgcaacaacaggagcgccagttacagactcagttgaca
caggcacaacagcaacaagcctggctacgacgtcagcaggagcagcaacaggcggtgagc
caggccgaggcgcaggcggcgcaggcgcagcaccactggcagtcgatccagccgcaactg
gcgcgtctcgcgcaggctgaaccggcgctgcgtctacacccgcactaccaagggtggact
caggccgaacaggatctgcgccacgccgaccaacgccaacaacagctagaacagcaacta
caggcactacgctgccagcaggcccccctgcaacaggcgttacagcaggcgctcgaccaa
cagcagcatttccgccagcgacgtgacgcgacccagacgctgatcagccaacaggtcgta
ccgctcgatcaggcgctcggtaagctggaagaggcgaaggcgcaacgggcacaacagtgt
caggaaagccatcagcagcaacagcgtctacaacagcagcaccagcagttaacggcgcaa
cgccaggcattacagcacgagttagacactctgcaacggcaacgggaagcgacgctcgcc
cacgctcagtggggcgaacggctgccgcgctggcagctgtggttcgaacagcgcgcgaca
ctggatgccgacgcccagcgactcgaaaacgcacggctaagccagacagcacaagcggcc
gaactccagcgtcaacatgccgagcggcaacaggcgctacgcaccctacagcaagccgag
caggcacaacgccaggcgctcaacgcgctggaagccgaacaacaggcctggcgacaacgt
catccgcccgagcagctagccgccgagcacgcccggctgcaacagggcgatgaggcccgc
caacagttgatcgccctgcaacccctggcgcaacaagagatcgcccgcaatgcggcgctc
acgctccagctcgccacgttacagcaagcgcagcaacagttgacacaacagctggcggag
aagcggcgccactacagcgaaaaacgccagcatctgctcgatctggagcggcagatcgcg
ctccaacagcgcatcctcagtctggaggccgagcgggcccgactgatcgacggcgagccc
tgcccgctgtgtggcgccaccacacatccactggcgcatgccggcccgcgccccacactc
gatgaaagtcaacaacgacgcgatcgcctcagccaagcggtagagcgcctcgggcaagag
ggcagcgcactgagcgagcgcctccggcaagccaccgcgcaacaccgccaactgagcgac
gaacaacaacagttacaacagcgcctgacgcaacagcgtacgcgctggcaacagctctgc
gaggcgctggcgctgagcgtacctctcgacgatgcgacggcactcgccgactatctccag
caatgcaccgcgcaggctcgcactctggaacagcttcaacgtcaaggcgaggcgctcgaa
cagcgtctgcgccaggcgcgcgatgacttcacgcaggccagcgtcggcgtcagccaggca
cagcatgcattggggctactggcacaacaacaccaggcgctgacgcagcggcaacacgaa
cagacccaacaacagcacacgctgacgcagcaacaggacgcgctgcaacagcaaatcgcc
gccgatctggccgattgtgccctaagcgtccccgacgcggcacagagcgaagcctggctg
gcggcgcgccaggcggaacggcgacgctggcagcaggatgaggagcgggagcaacagtta
cggcaacaaaggctgaccctcgacgagcagtggcgcctgctacaacaacggctcgacgag
cagaatcaacgccaccagacgctgacgcgtgaacaccaggcgctagtcgagcaacaccac
acgctacagacacaacgccaaacactgctcgacggtcaacccgtcgcgcaggtacaggcc
gagctacaacagcaggagcaggcgcaggagcagcgcttaagcgaggcgcagcgcgccagc
ctgaactggcaacaacaatatgagcgactcagcggtgaactggcggccgcccatcaacag
caacaaacattgagccaacgccacgcgaccttgcaccagcagtggcaggcggccctcgcg
gcctcccccttcgacgatgaggcggcttttcttgccgccaggttaagccaagaggcatcg
cagcatctcaccgcgctgcgcgatgacggccaacgccgctgccagcagagtgcggcgtta
ctggcggcggcacgccaggcttggcgcgacggtgaggccagccggccggctgcgttgtgc
gtcagcgaggacgatcccgatctgcgccaccgctgcgccgagctgggccaacgcctacgc
caacttgggctgcatcaaggtgagctacagcagcaattgcacagcgatagccagcgccgc
ctcagtctacagagctggctcgacgagatcgcccaacgggaacgaacctaccaggaatgg
agctatcttaaccaattgatcggctccagcagcggcgataagttccgtaaattcgcccag
gggctgacgctggatcatctggtctatctggccaaccggcaactgatgcgcctgcatgga
cgctatcaactgcaacggcgtgcaggcgatacactggagctggaggtggtcgacacctgg
caggcggatgcgcggcgcgatacccgcacactctccggcggcgagagtttcctggtcagt
ctggcgctggcgctggcattatcggatctggtcagccacaaaacccgcattgactcgctg
tttcttgatgagggcttcggcacgcttgatgccgagacgctggataccgccttggatgcc
ctcgataccctgaacgccagcggcaaaaccatcggagtgatcagccatatcgacgcgatg
aaggagcgtatcccattgcagattcgagtgaagaagatcaacggactgggcttcagtcgc
ctggacagtcgttatcgggtaggggatggcgaggctgactag
DBGET
integrated database retrieval system
