Emiliania huxleyi: EMIHUDRAFT_97731
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Entry
EMIHUDRAFT_97731 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K20826
RNA polymerase II-associated protein 1
Organism
ehx
Emiliania huxleyi
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehx03021
]
EMIHUDRAFT_97731
Transcription machinery [BR:
ehx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
EMIHUDRAFT_97731
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
Motif
Other DBs
NCBI-GeneID:
17284799
NCBI-ProteinID:
XP_005791957
JGI:
Emihu1_97731
UniProt:
R1DVT6
LinkDB
All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MAPPAAKATRVAALPSQRQPGSSALPLLNPDAVLPSRPAAGQPVPDAPECPPVAVVGAIR
ERTLDVGAPSRRLASERGFPQARHRDSITEELRNQLRGRPVVRGSCCGAVAPPTPAAGAR
TPSALDRELIASGVGAENAGRLAEMSGAEIAEARQKLVETLDPDLLRKLRRGRGEGVADP
ARPAASAAAGTSAPPPPPSAPPARASPGVDAAGGEGGGEGGGEGGSEGGGEVGARAPSLE
ELKLEWTRPADAPPLLAAAASDTRAPGDGAPPALGDGFGSGSVESALEAAMRAAGLHDER
FDFGGALVRGERPVHEGLHHHGAAAEAAGYTLAELVHLSRSTVPAQRATALRALARVWSV
HSSGRLAASVRRWSRDADAAASAELRGAGAAAGAAETADLDPGAEAGGDAELCRRDLLGG
WLKMGLAERLRYLAEVADLEPAARQHALTLLCMAARGSPARALTICRTPRLLPLVASMLR
CGDADAASLALALSLVQLLASSGRESAAFLLEAEVLSSCHARFLSATRATAAHDAVSDLA
DARRLGAAAVAVWRCLVAYGLTAPSLGSWFPVLSLATHPRGGCGEGEEAAARLACATLGL
VETLCGAGHPVTHPPPGERPGRAAAGRGVDDISTQVADAVAALGPPSAGASGAPALSDAE
AQCLGGSFDPSPAEEGRWRHLAAFVPPAVEALLADAGGAADAGGAGGAAGAEVSASRLHL
LASYLQAMPRHAAASATPLTGACELPLLPWCTIVAERLMLPAATRATAKAAGGGGSDGGA
GALGWAVALVERAASAGEAGAAVESAHLRTALELLLGYARLWWQLTRQHRGLLLQLGATD
AHALLWRLAALLPAAIGPAGREPLKAGSGQRLRARHELRLSGRLAYFLLMLLDGVDGGGV
PPTDGGRDASRGSAAARSFLQLAACSLGWMRAGDEALAQGVASSLLLAARWLRRADLACT
DAPDAPALLASFRPALLSPLLQLLRLPKTAQAEAQACEGRRPRFELAVPLAAAEPLTAAS
GCGLDAHAHVYTLPAAPWRDAVVAASLRALLDSWAAEGGEARAADFAAGSSLLGGEPQAD
VMSLVTRTLDHFSAESLGDPLYTQWALLPLRSAEPAALQIEAWGQLEALAHKLCVDPPPP
SRLCAWAAQPQAPAADGDRLLELLEHSLQRGNLSRAEGADTSFLLRWALHHLAAAAEGGR
APLLAARVAEWPEAWRRVAAAGLE
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcctgcggccaaggccacgcgcgtcgcagcgctgccgagccagcgccagccg
ggctcgtccgcgctcccgctcctcaacccggacgccgtgctcccgagccggcctgcggct
ggccagcccgtgcccgacgcgcccgagtgcccgccggtagctgtggttggcgcgatccga
gagcggacgctcgacgtcggcgcgcccagccgccggctcgcctccgagcgcggcttcccg
caggctcgccaccgcgacagcatcacagaggagctgcgcaatcagctgcgcggccggccg
gtcgtgagaggttcgtgttgcggcgctgtcgcgccgccaacacccgccgccggtgcgcgc
acgccgtcggcgctcgaccgtgagctgatcgcgtctggcgtcggcgcggagaatgccggc
cggcttgcagagatgagcggcgcagagatcgcagaggcgcggcaaaagctggtcgagacg
ctcgatccggacctgctgcggaagctgcggcgcggccgcggggaaggcgtagccgatcca
gcccgcccagccgccagcgcggccgccggtacgagcgcgcctccgccgccgcccagcgcg
ccgccggcacgagcgtcgcctggcgtcgacgcggctggcggcgagggtggcggcgagggt
ggcggcgagggtggcagcgagggtggcggcgaggttggcgcgcgtgctcctagcctcgag
gagctcaagttggagtggacgcgccccgccgacgcgccgcccctcctcgccgccgcggcc
tccgacaccagggcgccgggcgacggcgccccgccggcgctcggcgacggcttcgggagc
ggttcggtcgagtcggcgctagaggcggcgatgcgcgcggcggggctgcacgacgagcga
ttcgactttggcggcgcgctcgtgcgcggggagcggcccgtccacgagggcctgcaccac
catggtgcggcggccgaggcggcgggctacacgctcgcggagctggtccacctcagcagg
tcgaccgtgccggcgcagcgcgcgacggccctccgcgcgctcgcccgcgtgtggagcgtc
cactcgtcaggccggctcgccgcctctgttcggcgctggtcgcgcgacgcggacgctgcg
gcctccgccgagctgcgcggcgctggcgctgcggcgggggccgccgagacggccgatctc
gatccgggcgctgaggcgggcggcgacgcggagctctgccggcgcgacctgctcggaggg
tggctgaagatgggcctcgcggagcggctccgctacttggcagaggttgcggacctggag
ccggcggcgaggcagcacgcgctgacgctgctgtgcatggcggcgcgaggcagccccgcg
cgtgcgctgaccatctgccgcacccctcggcttctgcccctcgtcgcctcgatgctgcgg
tgcggcgacgccgacgccgcttcgctcgcgctcgcgctctccctagtgcagctgctggcg
agctcgggccgcgagtctgcggccttcctgctcgaggcggaggtgctgtcgtcgtgccac
gcccgcttcctgtccgccacgcgagcgaccgccgcgcacgacgcggtgtcagaccttgcc
gacgcccggcggctcggcgcggccgcggttgccgtgtggcgctgcctggtcgcctacggc
ctgaccgcgccctcgctcggcagctggttccctgtcctctccctcgccacccacccccga
ggcggctgcggcgagggcgaggaggccgccgcgagactcgcgtgcgccacgctcggcctc
gtcgagaccctctgcggcgccggccaccccgtcacgcaccctccgcccggcgagaggccc
ggccgcgcagccgccggccgcggcgtcgacgacatctcgacgcaggtggcggatgcggtc
gccgcgctcggcccgcccagcgccggtgcgagcggcgcgccggcactctccgacgccgag
gcgcagtgcttgggtggcagcttcgacccgtcccccgcggaggaagggcggtggcgccac
ctcgccgccttcgtcccgccggcggtcgaggcgctgctcgcggacgcggggggggcagca
gacgcggggggggcgggcggcgccgcgggggcggaggtgtctgcgtcgcggctccacctc
ctcgcctcgtacttgcaagccatgccgcggcacgcggcggcgagcgccacgccactcacg
ggcgcgtgcgagctgcccctcctgccgtggtgcaccatcgtcgccgagcggctgatgctg
ccggcggcgacgcgcgcgactgcaaaggcggcaggcggtggcggcagcgacggaggcgca
ggggcgctgggctgggcggtggcgctggtggagagggcggcctccgccggcgaggcggga
gcagcggtggagagtgcgcacttgcggaccgcactcgagctgctgctgggctacgcgcgg
ctgtggtggcagctgacgcggcagcaccgcggcttgctgctgcagctgggcgcgacggac
gcgcacgcgctgctgtggcgactcgcggcgctgcttcccgccgccatcggacccgccggc
cgggagcctctgaaggccggctcggggcagcggctgcgcgcgaggcacgagctccgtctc
tccggccggctggcgtactttcttttgatgctgctggacggcgttgatggcggcggcgtt
cccccgaccgacggcggccgcgacgcttcgaggggcagcgccgcggctcgctccttcctg
cagctcgccgcgtgttcgctcggctggatgcgcgccggcgacgaggcgctggcgcaaggc
gtcgcgtcgtctcttctgctcgcggcgcgctggctgcgccgagccgacctcgcgtgcacc
gacgcccccgacgctcccgctctgctcgcctcgttccggccggcgctgctctctcccctc
ctgcagctcctccgcctgccaaagaccgcacaggccgaggcgcaggcgtgcgagggtcga
aggccgcgcttcgagcttgctgtccctctggccgcggccgagccgctcacggctgcctct
ggctgcggactggatgctcacgcccacgtctacacgctccccgcggcgccttggcgcgac
gctgtcgtcgccgcgtcgctgagggcgctcttggactcgtgggcggcagagggcggggag
gcgcgagcggcggactttgcggcagggtcgtcgcttctcggcggcgagccgcaggcggac
gtgatgtccctggtgactcgcacgctcgaccacttctccgccgagtcgctcggcgacccc
ctctacacgcagtgggcgctgctcccgctccgctccgccgagcccgccgcgctgcagatc
gaggcgtgggggcagctcgaggcgctggcacacaagctgtgcgtggacccgccgccgccg
tcgcgtttgtgtgcgtgggccgcccagccgcaggcgccggccgccgacggggatcggctg
ctcgagctgctcgagcactcgctgcagcgcggcaacctgtcgcgcgccgagggggcagac
acgtctttcctcctccgctgggctctccaccacctcgccgcagccgcagagggcggccgc
gcgccgcttctcgccgcgcgggtcgccgagtggcccgaggcttggcggcgagtggcggcg
gcgggactggagtga
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