Encephalitozoon intestinalis: Eint_070020
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Entry
Eint_070020 CDS
T02238
Name
(RefSeq) DNA-directed RNA polymerase subunit alpha
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ein
Encephalitozoon intestinalis
Pathway
ein03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ein00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Eint_070020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ein03021
]
Eint_070020
Enzymes [BR:
ein01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Eint_070020
Transcription machinery [BR:
ein03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
Eint_070020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
9697944
NCBI-ProteinID:
XP_003073127
UniProt:
E0S7T2
LinkDB
All DBs
Position
VII:1318..5265
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AA seq
1315 aa
AA seq
DB search
MLKRVEEDEVDIRIKRISFGLLSPRDISGLSVHEISSKDLYDINTRVPLPNGPLDLRLGV
GNKKDKCATCGEGLATCIGHFGEVKLVLPVFNIGLVKNTISTLNCLCKSCGSILLGEKKK
IYFKKKLRESSGGNDTKLILRKIIAECKKANVCFVCSSRNGQVKKTFGFRMVHEIEDLEK
RKKDKNKGSGGVNSSDYEEINPLMALNIFRMMKEDDYELLGFSESPERLIIQSIIVPPSC
IRPSVSMDDEGTNEDDITIKISEIVHTNKVLKEGIEKGNPLNLINEDWDHLQLQCALLIN
SELPQVGIPGQPIRGIVQRLKGKNGRFRCNLSGKRVDFSGRTVISPDPNLSIEEVGIPER
MAKILTISERVTSFNKKKLQALVLNGPEKYPGANYVVGEKFKRFLMYGKKDTELKEGEVV
ERHLLDGDMVLFNRQPSLHRMSIMSHKVKVHGNKTLRFNECVCTPYNADFDGDEMNVHVP
QTEKARAESSILMSVSNNIVTPRHGEPIVAATQDFITGLYLITGKDTFFDRERFGQLVSY
FSETRISMKPAIKKPVELFTGKQLVEALIKDSFAASREDYRSPYGGCISLVGKNRSFKTH
DDPNDGSVIILDNLYYFGRLDKSIIGGENKKDSLIYAIMKVSNKAAIRVMNSITKLCSRY
LGEVGFSIGLDDVQPGPILRQKKETVVGKGYLECENKILEYSKKSESSEEMLEMEISSIL
NRIREECGSICINELSIRNSPNTMQACGSKGSKINVSQMVACVGQQIVSGTRIPNGMDDR
CLPHFRKGSRTPESKGFVRNSFFDGLTSPEFFFHAVSGREGLVDTAVKTAETGYMQRRLM
KALEDLSVQYDGSVRNSNMEVVQFSYGEDQIDPVISEGDDPVNLERVFLQAKSVFLHQLN
SGRFSHSLQPESCDVIDSLRELIPKGYPIERMINKRFVKSLQELIKSKSEERFSFDGTSF
PYFSSRDFVRTFFFMVSQKMMDLIIEPGTTVGAIAGQSIGEPGTQMTLKTFHFAGVASMN
ITLGVPRLKEIINAVCNISTPIINAELNDSQNLFAAEVIKGRIGRISLKDICSSLTEVVD
KEEIFLDIAIDLESLSRLKLNLDIHKIERLLSLHDQIRIVGNNVLRVFIKKITDQSYFNL
QKIKKKLLGTRICGAPQISRVIINSNKGQYSLVIEGTGLLSVINTDGIRCSSVTSNSVTE
VEEVLGIEAARAQIIHEIEYTISNHGIKIDPRHIMLLADTMTYRGEVFGITRFGISKMSR
STLMLASFEQTSDYLFEAAAQNKSDEICGVSESIILGIPICIGTGSIDLYWRRDS
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaaagagtcgaggaagatgaagtggatataagaatcaaaaggatatcttttggc
ttgttatcaccgcgggatatttcgggactatcggtgcatgagatttcgagcaaggatctg
tatgacataaacacgagagtgcctttaccgaatggccccttggacttgaggttaggtgtt
ggaaacaagaaggacaagtgtgcaacatgtggagaaggattggctacgtgtatcggacac
tttggagaggtgaagctggttcttccggttttcaatatagggctagttaagaacacgatt
tctacgctaaattgtctttgcaagagctgtggatccatccttcttggagaaaaaaagaag
atatacttcaaaaagaagttacgagagagtagtggtggaaacgacaccaagcttatttta
agaaagattattgcggaatgtaagaaggcgaatgtttgctttgtatgctcctctaggaat
ggacaagtcaagaaaacgtttggattcagaatggttcatgagattgaagatcttgaaaag
aggaaaaaagataaaaataaaggatcgggaggagtaaattcttcggattacgaagaaata
aatcctttaatggcgcttaacatatttaggatgatgaaggaagacgactacgaactcctt
gggttttccgagtcacctgaacgacttataatacaaagcatcatagttccaccatcctgc
attcgtccaagtgtatctatggatgatgagggaacaaatgaagatgacataacaattaaa
ataagcgaaattgtccatactaacaaggtgcttaaggaaggaatagaaaagggaaacccg
ctaaaccttataaacgaggattgggatcatcttcagcttcaatgtgcactactcatcaat
tcggagcttccccaggtagggattcccgggcagccgatccgaggaatagttcaaaggcta
aagggaaagaatggaagatttagatgcaatctaagtgggaagagagttgatttcagtgga
aggacggttatctcacctgatccaaatctaagcatcgaggaggtggggataccggaaaga
atggccaagatattgactatttccgaaagggtcacaagcttcaataagaagaagctgcag
gctctagtgttaaatggccctgaaaagtatccgggggctaattatgtggttggagagaag
ttcaagaggtttttgatgtatgggaagaaagacacagaactcaaagaaggagaggttgtc
gagcgacacttactggatggagatatggttttatttaacagacagccttctcttcatcgg
atgagtattatgtctcataaggttaaggttcatgggaataagactctccggttcaatgag
tgtgtttgtacaccatacaacgcagactttgatggggatgaaatgaatgttcatgttcct
caaacagagaaagcacgagccgaatcatccattttgatgtctgtttcaaataacattgtc
acgccaagacatggagagccgattgtagctgccacccaagactttattactggattatat
ttgataactggaaaagatacctttttcgatcgagagagatttgggcagcttgtaagctat
ttttcagagacaagaatcagtatgaaaccagcgataaagaagcctgtggagctatttact
ggaaaacaattggtagaggctcttatcaaggactcatttgctgcaagtagggaggattac
cgaagtccttatggtgggtgcatttctctcgtaggtaagaacagatcattcaagactcat
gatgatcctaacgacggaagtgtgataatattggacaacctctattacttcgggcgcctt
gacaaatcgataataggaggagaaaataaaaaggacagccttatttatgcaataatgaaa
gtgagtaataaggctgcaataagagtcatgaatagcataacgaagttatgttcaagatat
cttggagaagttggtttcagcataggccttgacgatgtacaaccagggccgatattacgg
caaaagaaggagacagttgtcggaaaaggatatttggagtgcgaaaacaagattttggaa
tattcgaaaaaatcggagtccagtgaagaaatgctggaaatggagatatcttcaattctc
aacagaattagagaggaatgtggatctatatgcataaacgagctaagtatcagaaactct
ccgaacacaatgcaagcatgtggatccaaaggctccaaaattaatgtttctcagatggta
gcctgtgtagggcaacagattgtgagcggaaccaggattccaaatggaatggacgataga
tgtcttccccatttccgtaaaggatcgaggactcctgaatcaaaaggatttgtacggaac
tctttctttgatggactaacgtctccagaattctttttccatgcagtgagtgggcgggaa
gggcttgttgatacagctgtgaagactgcagaaacgggatatatgcaaagacgtcttatg
aaggctcttgaggatctaagtgtccagtacgacggtagtgttaggaattcaaatatggag
gtggtccagttttcctatggtgaagatcagatcgaccccgtaatctcggaaggagatgat
cctgttaatcttgaaagggtgtttttgcaagccaagtctgtttttttgcatcagctcaat
tcgggtcggttctcgcattctcttcaaccagaaagttgcgatgtgattgatagcctcaga
gaactaatacctaagggatatcccattgagcgcatgattaacaaaagatttgtaaaaagc
cttcaggagctcataaaatctaagagtgaggaaagattctcttttgatgggacttctttc
ccatatttttcatccagggactttgtaagaacatttttcttcatggtatcgcaaaaaatg
atggatttgattatcgagcccggaacaacagttggagcaatagctgggcagagtattgga
gagccgggaacccagatgacactgaaaacattccactttgcaggagtagccagtatgaac
atcacccttggtgttccaaggttgaaggagataattaatgctgtttgtaacattagtaca
cccattataaatgcagaactaaatgattcacagaatctgtttgctgctgaggttataaaa
ggtaggattggcagaatttccctgaaggatatatgttcttcgttaacagaggttgttgat
aaagaagaaatattcctcgacattgccatagatttggaaagcctttctcgcctaaagtta
aatttagatattcataaaattgagaggttgttaagtcttcatgaccaaataaggattgta
ggtaataatgtcctcagggtatttatcaagaagatcactgaccagagctacttcaacctt
caaaagatcaagaagaaattgctgggcacaagaatatgtggagcaccccaaataagcagg
gtgattataaatagcaataagggacagtatagtctggtgatcgaggggactggactcttg
agtgttataaacacagatggaataaggtgcagtagtgtgactagcaacagtgtaacggaa
gtagaggaagtattggggattgaagcggcaagggcccagataatccacgagatcgaatat
actataagcaaccatgggatcaaaatagatccaaggcatataatgctcctggcagacaca
atgacatataggggagaagtatttggaataacaaggtttggaatctcaaagatgtccaga
tctactcttatgttagcatcttttgagcaaaccagtgattatttgtttgaggcagctgca
caaaacaaatccgatgagatatgcggtgtcagcgagtccataattcttggaattccaatc
tgcattggtactgggtccattgatctgtactggaggcgcgattcttag
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