Escherichia coli KO11FL: KO11_05005
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Entry
KO11_05005 CDS
T02104
Symbol
lpfC1
Name
(GenBank) long polar fimbrial outer membrane usher protein LpfC
KO
K07347
outer membrane usher protein
Organism
ekf
Escherichia coli KO11FL
Pathway
ekf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ekf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KO11_05005 (lpfC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ekf02000
]
KO11_05005 (lpfC1)
02044 Secretion system [BR:
ekf02044
]
KO11_05005 (lpfC1)
02035 Bacterial motility proteins [BR:
ekf02035
]
KO11_05005 (lpfC1)
Transporters [BR:
ekf02000
]
Other transporters
Pores ion channels [TC:
1
]
KO11_05005 (lpfC1)
Secretion system [BR:
ekf02044
]
Chaperone-usher system
Type 1 pilus assembly protein
KO11_05005 (lpfC1)
Bacterial motility proteins [BR:
ekf02035
]
Pilus system
Fimbrial proteins
KO11_05005 (lpfC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
Motif
Other DBs
NCBI-ProteinID:
AFH15988
LinkDB
All DBs
Position
1075102..1077633
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AA seq
843 aa
AA seq
DB search
MHWMHLPLYHYRAHFSFSLLALTIASSLPAYGGKFNPKFLENVQGIDQHIDLSVYDSPVG
QQIPGKYRVSVFVNEEKMASRTLDFSTASEAKRKASGESLMPCLSRVQLEEMGVRVDSFP
ALKMSPPEACVAFDEIIPQATSRFDFNTQTLHLSFPQAAMMMTARGTVDPSRWDEGIPAL
LLDYSFSGSNGRNEGTGSSSDSTSDSYYLNLRSGLNVGPWRLRNNSIWNRTDGKNQWDNV
GTSLNRAIIPLKSQITLGDTATPGEIFDSVQMRGALLASDDEMLPDSQRGFAPVVRGIAK
SNAEVSIEQNGYVIYRTFVQPGAFEINDLYATSGSGDLTVIIKEADGSEQRFIQPFSAVA
IFQREGYLKYSLAAGEYRAGNYDSDKPHFGQFTAMYGLPWGMTAYGGALLSADYSALALG
LGKNFGTIGAVSVDVTQAKSQLRNNEKEEGQSYRFLYSKSFEGGTDLRLLGYKYSTSGYY
TFQEATDVRSDADSDYRRYHKRSQIQGNITQQLGDYGSVYFNMTQQDYWNVDGKENSLSA
GYHGHIGRVNYSVAYTWTRSPEWEEDDRLWSFSVSIPLGGAWSSYRMTTDQNGKTSQQAS
VSGTLLEDRNLSYNVQQGYTSNGVGYSGSVNMGYMGGSGNIDVGYNYSKDNQQVNYGVRG
GVIVHSEGITLSQPLGESLAIVSAPGARGGHVVNSSGVEVDWMGNAVVPYLTPYRETIVE
LRSDTLGQNVELQEAFQKVVPTRGAVVRSRFDTRVGYRVLMSLKQANGNAVPFGATAALI
DESKPASSIVGEEGQLYISGMPEEGELQVSWGNEQAQRCRVPFRLPENKDNAAIVMVNAV
CEK
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgcattggatgcatttacctctctatcactacagagcgcatttttccttctctctgctg
gcattaacgattgccagctcgttacctgcgtatggcggaaaatttaaccctaaatttctc
gaaaacgttcagggtatcgatcaacacatcgacttgtcggtatacgactcacctgtcggc
cagcaaatccccggtaaataccgggtttcggtgtttgtaaacgaagaaaaaatggcttcc
cggacgctggattttagtaccgccagcgaagcgaaacgcaaagccagcggtgagtcgctt
atgccttgccttagccgggtgcaactggaagaaatgggcgtgcgcgttgacagctttccg
gcgctgaagatgtcaccaccagaagcctgcgtagcgtttgatgaaatcattccccaggcc
accagccgctttgattttaatactcagacgctgcatctttcctttccacaggcggcaatg
atgatgaccgctcgcggcacggttgatccttctcgctgggacgaaggaatacctgcgctg
ttgctggattacagctttagtggcagcaatggacgcaatgaaggtacaggttcatcttca
gattcgaccagtgacagttattacctgaacctgcgcagcggtttgaacgttggtccgtgg
cgtttacgtaataacagtatctggaaccgtaccgatggcaaaaaccaatgggataacgtt
ggtacatcgttaaaccgggcaattattccacttaaatcacagataactctgggtgatacc
gccacgcctggcgagatttttgatagcgtacaaatgcgtggggcgttactggcatccgac
gatgaaatgttgccggacagccagcgtggctttgctccggtagtgcgcggcatcgccaaa
agcaacgctgaagtgagtatcgaacagaacggctatgtcatttatcgcacttttgttcag
ccgggtgcatttgagattaacgatctctacgcaacctccggcagcggcgacctgacggtg
atcattaaagaagccgacggaagtgaacaacgttttatccagccgttttcggcggtggcg
attttccagcgtgaagggtatctgaaatacagtctggctgccggtgaatatcgtgctggt
aattacgacagcgataaaccacatttcgggcagtttaccgccatgtacggcttgccgtgg
ggtatgaccgcctacggtggtgcattgttgtcggcagattacagcgctttagctctgggc
ctggggaaaaacttcggtaccattggcgcagtatcggtggatgtcactcaggcgaaaagt
cagttacgcaacaatgaaaaagaggaaggccagtcttatcgcttcctctattcgaaaagt
tttgagggtggcactgacctgcgtctgttgggctacaaatactcaaccagcggctactac
accttccaggaagcaactgatgttcgcagtgacgccgacagtgattaccgccgttatcac
aagcgcagccagatacagggcaatattacccagcaactgggagactacggctcggtttat
ttcaatatgacgcagcaggattactggaacgttgacggtaaggaaaactccttaagcgcc
ggttatcacggtcacattggtcgggtgaattacagcgtggcctatacctggacgagaagt
ccggaatgggaagaagacgatcgcttgtggtcattcagtgtttccatccctctggggggc
gcgtggagcagttatcgcatgactaccgaccagaatggcaagacgtcgcaacaggcctct
gttagcggcacgttactggaagatcgtaacctgagctataacgttcagcagggttacacc
agtaatggcgtaggctacagtggcagcgtcaacatggggtatatgggtggctctggtaac
attgacgtaggctataactattctaaagataaccaacaggttaactatggcgtgcgcggc
ggtgtcatcgttcacagtgaaggtataacgctttcgcagcctttaggcgaaagtctggcg
attgtttctgcaccgggcgcgcgtggtggacatgtggttaacagcagcggcgtagaagtt
gactggatgggcaacgccgtggtgccttatctcacaccatatcgtgaaaccattgtggaa
ttgcgtagcgacacgttggggcaaaacgttgaactacaggaagcgttccagaaagtcgtg
cctactcgtggtgcagttgtgcgttcccgctttgatacccgcgtcggttaccgtgtgctg
atgagcttaaaacaggcgaatggcaacgcagtaccgtttggtgcaaccgcagcgttaatt
gatgagagcaaacctgccagcagcattgtgggtgaagaaggacagctttatatcagcggg
atgccagaagagggcgaattgcaggtgagctgggggaacgagcaggcgcaacgttgccgt
gtgccattccgcttgccagagaacaaggacaatgcggctatcgtgatggttaatgcggta
tgcgagaaataa
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