Escherichia coli KO11FL: KO11_06945
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Entry
KO11_06945 CDS
T02104
Symbol
yraJ
Name
(GenBank) putative outer membrane protein
KO
K07347
outer membrane usher protein
Organism
ekf
Escherichia coli KO11FL
Pathway
ekf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ekf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KO11_06945 (yraJ)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ekf02000
]
KO11_06945 (yraJ)
02044 Secretion system [BR:
ekf02044
]
KO11_06945 (yraJ)
02035 Bacterial motility proteins [BR:
ekf02035
]
KO11_06945 (yraJ)
Transporters [BR:
ekf02000
]
Other transporters
Pores ion channels [TC:
1
]
KO11_06945 (yraJ)
Secretion system [BR:
ekf02044
]
Chaperone-usher system
Type 1 pilus assembly protein
KO11_06945 (yraJ)
Bacterial motility proteins [BR:
ekf02035
]
Pilus system
Fimbrial proteins
KO11_06945 (yraJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
DUF1968
Motif
Other DBs
NCBI-ProteinID:
AFH16371
LinkDB
All DBs
Position
complement(1477994..1480510)
Genome browser
AA seq
838 aa
AA seq
DB search
MPQRHHQGHKRTPKQLALIIKRCLPMVLTGSGMLCTTANAEEYYFDPIMLETTKSGMQTT
DLSRFSKKYAQLPGTYQVDIWLNKKKVSQKKITFTANAEQLLQPQFTVEQLRELGIKVDE
IPALAEKDDDSVINSLEQIIPGTAAEFDFNHQRLNLSIPQIALYRDAKGYVSPSRWDDGI
PTLFTNYSFTGSDNRYRQGNRSQRQYLNMQNGANFGPWRLRNYSTWTRNDQASSWNTISS
YLQRDIKALKSQLLLGESATSGSIFSSYTFTGVQLASDDNMLPNSQRGFAPTVRGIANSS
AIVTIRQNGYVIYQSNVPAGAFEINDLYPSSNSGDLEVTIEESDGTQRRFIQPYSSLPMM
QRPGHLKYSATAGRYRADANSDSKEPEFAEATAIYGLNNTFTLYGGLLGSEDYYALGIGI
GGTLGALGALSMDINRADTQFDNRHSFHGYQWRTQYIKDIPETNTNIAVSYYRYTNDGYF
SFDEANTRNWDYNSRQKSEIQFNISQTIFDGVSLYASGSQQDYWGNNDKNRNISVGVSGQ
QWGIGYSLNYQYSRYTDQNNDRALSLNLSIPLERWLPRSRVSYQMTSQKDRPTQHEMRLD
GSLLDDGRLSYSLEQSLDDDNNHNSSLNASYRSPYGTFSAGYSYGNDSSQYNYGVTGGVV
IHPHGVTLSQYLGNAFALIDANGASGVRIQNYPGIATDPFGYAVVPYLTTYQENRLSVDT
TQLPDNVDLEQTTQFVVPNRGAMVAARFNANIGYRVLVTVSDRNGKPLPFGALASNDETG
QQSIVDEGGILYLSGISSKSQSWTVRWGNQADQQCQFAFSTPDSEPTTSVLQGTAQCH
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgccacaacgacaccaccagggacataaacgcacaccgaaacagttggcgctcatcatc
aaacgctgtttgccgatggtgctcactggcagcggcatgctttgcactaccgctaacgcc
gaagagtattatttcgaccccattatgctggaaactacaaaaagtggtatgcaaacaact
gatctgtcacgtttttcaaaaaaatacgcacaactaccaggaacttatcaggttgatatc
tggctgaataaaaagaaggtttcacagaaaaaaattacatttaccgccaatgcagagcaa
cttctgcagccacagtttacggtagaacaactacgtgagctgggtattaaggtggatgaa
atcccggcgctggctgaaaaagatgacgatagcgtgatcaactcgcttgaacaaatcatt
cccggtacagctgctgaatttgatttcaatcatcagcgacttaatttgagcattccccaa
attgcactgtaccgtgatgcaaaaggttacgtctccccttctcgttgggacgatggtata
ccaacgctgtttaccaactactcgtttacaggttctgataaccgttaccgccagggcaat
cgtagccaacgacagtacctgaatatgcaaaatggtgctaattttggcccctggcgatta
cgtaactattctacgtggacacgcaacgatcaggcgtcaagctggaacactatcagtagt
tatttacaacgtgatatcaaggcgttgaagtctcagttgcttctgggagaaagcgccacc
agcggcagtattttttccagctacacctttactggcgtgcaactcgcttccgacgataat
atgttgccaaacagccagcgcggatttgccccaacggtacgcggtatcgcaaacagtagt
gcaatcgtgactatcaggcaaaatggttatgtgatctatcaaagcaacgtgccagcgggt
gcctttgaaattaacgatctctacccctcttccaacagcggcgatttagaagtcacgatt
gaagaaagtgacggtacgcaacgtcgctttatccagccttattcttcattacccatgatg
cagcgacctgggcatctaaaatatagcgcgaccgctggacgctatcgcgctgatgcaaac
agtgatagcaaggaacccgaatttgctgaagccacggcaatatatggtttgaataatact
tttacgctgtatggcggcctgctcggttctgaagattattatgcgctggggatcggtatc
ggcggcacacttggcgcactgggcgcgttgtcgatggatatcaacagagctgacacccaa
ttcgataaccggcactcttttcatggctatcaatggcgtacgcagtacatcaaagatatc
ccggaaaccaacaccaatatcgctgttagctactatcgctataccaacgatggctatttt
agttttgatgaagccaatacccgtaattgggactataacagtcgccaaaaaagtgaaatt
caattcaacatcagccagacaatatttgatggggtaagtctgtatgcctccggttcgcag
caagactattggggcaataacgataaaaacaggaatatctcagttggggtttccggtcag
caatggggaattggttacagcctgaattatcaatacagtcgctacacggatcaaaataat
gaccgcgcactctctttgaatctcagtattccgttagaacgctggttaccgcgtagccgg
gtttcctatcagatgaccagccagaaagatcgcccaacccaacatgaaatgcgtcttgat
ggctcactgctggatgatggtcgcctgagctatagcctggaacaaagtctggatgacgat
aacaaccataacagtagcctgaacgccagttaccgttcaccttatggcaccttcagtgcc
ggatacagctacggtaatgacagcagccaatacaattacggcgttaccggcggcgtggtt
atccatcctcatggcgtgacgctctcgcaatatctgggcaacgcttttgcgcttatcgat
gctaatggggcttctggcgtgaggatacaaaactatccggggattgctactgatcccttt
ggctatgcagtggttccttatctcacgacttaccaggaaaaccgtctctcggtagatact
acgcagctgcccgataacgtcgatcttgagcaaacaacacagtttgtggtgcccaacaga
ggtgcaatggtagcggcgcgtttcaacgccaatatcggttatcgcgtacttgttacagtc
agcgatcgcaacggtaaaccgttgccctttggcgctcttgccagcaacgatgagacgggg
caacaaagtatcgtcgatgagggcggcatactatatctctctgggatatcgagtaaatca
caaagctggactgtacgctggggaaatcaggcagatcaacaatgtcagtttgcttttagt
acaccggattcagaaccaacaacctctgtattacaaggcacggcgcagtgccattaa
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