Eutypa lata: UCREL1_6709
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Entry
UCREL1_6709 CDS
T03103
Name
(GenBank) putative ccr4-not transcription complex protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ela
Eutypa lata
Pathway
ela03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UCREL1_6709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ela03019
]
UCREL1_6709
Messenger RNA biogenesis [BR:
ela03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
UCREL1_6709
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
UCREL1_6709
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
EAD9
WKF
Cep57_MT_bd
Med10
COG6_N
DUF1192
Transcrip_reg
Motif
Other DBs
NCBI-ProteinID:
EMR66315
UniProt:
M7THV6
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MAARKLQQEVDKCFKKVDEGVAEFEAIYEKIEQSNNASQKEKLEDNLKREIKKLQRLRDQ
IKTWAASNDIKDKAPLMEKRKLIETQMERFKAVEKAMKTKAYSKEGLSAAAKLDPKEQAK
VEASDFLNNVVDELEQQIEALEAESESIQVTMKKGKSQTAKAERIAAIERIIERHKWHQG
KLELIRRSLENGGVETDQVNDIEESIKYYVSEGMQDDFMDDDGLYDELNLQDEEETFGMP
QDNDKDSRPTESVASAQSPAPVPAAIARKVDSGKALQQNGVANGVRPTEEKEEESIYHLP
ASLQDLVESFETTKKRPIQVNTPSHLRMLAASQASLNMMDNFDSEPRRTYRPEVPTPSVA
GYPQEPLPIFDDPRLYGRIEPDTLFYVFYYKQGTYQQYLAAKALKDQSWRFHKQYQTWFQ
RHEEPKQITEEFEKGTYRFFDYESTWMNRRKAEFQFHYRFLEDDV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacgaaaattacagcaagaagtagataaatgcttcaagaaggttgacgaaggc
gtcgcagagttcgaggctatttacgaaaagattgaacagtcaaataatgcctcccaaaag
gagaagttagaagacaatctgaagcgtgagatcaagaagctccagcgcttgcgcgaccaa
ataaagacatgggccgctagcaacgacatcaaggacaaggctccgctcatggagaagcgg
aagctgatagaaacgcaaatggagcgatttaaagccgtggaaaaagccatgaagaccaag
gcttactccaaagagggtttatcggcagctgccaagttagatcccaaggaacaggctaag
gtagaagcaagcgatttccttaacaacgtggtcgacgaactagaacaacaaatcgaggcg
ctcgaagccgagagcgagtcgatacaagtcaccatgaaaaaggggaaaagccaaactgcc
aaagccgaacggatagctgcaatcgagcgcatcatcgagcgacataaatggcatcaaggc
aaactcgaactgatccggcggtccctagaaaacgggggggttgaaacagaccaggtaaac
gatatcgaggagagcatcaaatactacgtgtcagaaggcatgcaggatgactttatggac
gatgacggactttacgacgagctcaaccttcaagacgaggaagaaacctttggcatgccc
caggataatgataaggattctagacctacagagtcggttgccagcgcccagagtccagcg
ccagtgccagcagcgatagcaagaaaggtggactcaggcaaggcactacaacaaaatggt
gttgcgaatggtgttaggcctactgaggagaaggaggaagaatctatttatcaccttcct
gcctctttacaagacttggtagaatcatttgagacaaccaagaaacgaccaatccaggtt
aatactccttcacacctgcgcatgctagcagcctctcaagcgagtctgaacatgatggac
aactttgactcggagccgcggcggacctaccggccggaggtaccaactccttcggtagct
ggatacccacaagaacctcttccgatattcgatgatcctcgtttgtatggtcgtatagaa
cccgacacgctcttctatgttttctactacaagcaagggacatatcagcaatacctagcc
gccaaggcgcttaaggaccagagctggcggtttcataagcaataccaaacatggttccag
cggcacgaagagcccaagcagatcaccgaggagttcgaaaaggggacctatcgcttcttc
gactacgagtcgacttggatgaaccgtaggaaggccgagttccagttccactaccgcttt
ctagaagacgacgtttag
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