Elizabethkingia miricola: VO54_02266
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Entry
VO54_02266 CDS
T03757
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
elb
Elizabethkingia miricola
Pathway
elb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
elb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VO54_02266 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elb03400
]
VO54_02266 (ruvB)
Enzymes [BR:
elb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VO54_02266 (ruvB)
DNA repair and recombination proteins [BR:
elb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VO54_02266 (ruvB)
RecFOR pathway proteins
VO54_02266 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_22
AAA_16
TIP49
AAA_3
AAA_14
Rad17
nSTAND3
Bac_DnaA
TsaE
NTPase_1
NB-ARC
Sigma54_activ_2
RNA_helicase
AAA_PrkA
AAA_33
NACHT
AAA_18
AAA_24
TniB
AAA_28
AAA_19
AAA_17
bpMoxR
IstB_IS21
DUF815
AAA_11
ABC_tran
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
AJW63732
LinkDB
All DBs
Position
2427278..2428300
Genome browser
AA seq
340 aa
AA seq
DB search
MPNFLHPDKENFSDDELFQEDHIRPQSFRDFAGQRQTLENLEIFVAAAKSRNSSLDHVLL
HGPPGLGKTTLAHIIANELGVNCKLTSGPVLDKPANLAGLLTNLEENDVLFIDEIHRLSP
VVEEYLYSAMEDFKIDIMLETGPNARSVQIGLNPFTLVGATTRSGMLTKPLLARFGIQSR
LEYYNIELLSTIIQRSARVMGIKIYEDASIEIARRSRGTPRIANALLRRVRDFAEIKGNG
DIEIEITKFALNALKVDEYGLDEMDNKILRTMIENFKARPVGISALATSIGENPETLEEV
YEPFLIQEGFIIRTPRGREVTDKAYKHLNMAKPKRPDELF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcctaacttccttcaccccgataaagagaatttttccgatgatgagctttttcaggaa
gatcatattcgtccgcaaagtttcagagattttgcagggcagcgccagacattggaaaat
ctggaaatctttgttgcggcagccaaatccagaaacagttctctggatcatgtcttatta
catggcccgccgggattaggaaaaactactttagcacacattattgccaatgagcttggc
gttaactgcaaactgacttccggtccggtattagataaaccggcaaatcttgcaggatta
ttaacgaatctggaagagaatgatgtgttgtttattgatgaaatccatagactatctccc
gtagtcgaagaatatctgtattctgcaatggaagattttaagatagacattatgctggaa
accggtcccaatgcacgatcggtacagataggactaaacccttttacactagtaggtgca
actacgcgttccggtatgctaacaaagccattacttgccagatttggtatccaatccaga
ctggaatattataacatcgaattgctttctactattatacagagaagcgcaagggttatg
ggcatcaaaatctatgaagatgcttctatagaaattgctagaagaagtcgtggtacaccc
agaattgctaatgctttgctgagaagagtacgtgattttgcagaaataaaaggcaacggg
gatattgaaattgaaattaccaaatttgctctaaatgcattaaaagttgatgaatatgga
cttgatgaaatggacaacaagatattgagaaccatgatcgaaaactttaaagcacgtccc
gttggcatcagtgctttggctacttcaattggagaaaatccggaaacactggaggaagta
tatgaaccttttcttattcaggaaggctttattatccggactccgagaggacgtgaagta
accgataaagcctacaaacatttgaatatggccaagcctaagagacctgatgagcttttt
taa
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