Escherichia coli LF82: LF82_2398
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Entry
LF82_2398 CDS
T00854
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
elf
Escherichia coli LF82
Pathway
elf03420
Nucleotide excision repair
elf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
elf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LF82_2398 (uvrD)
03430 Mismatch repair
LF82_2398 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elf03400
]
LF82_2398 (uvrD)
Enzymes [BR:
elf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LF82_2398 (uvrD)
DNA repair and recombination proteins [BR:
elf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LF82_2398 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LF82_2398 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAP78256
LinkDB
All DBs
Position
4043144..4045306
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVRRPVSHQRMG
TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaatgacaaacagcgcgaagcggtggccgcg
ccacgcagcaaccttctggtgctggcgggcgcgggcagtggtaagacgcgcgtactggtg
catcgtatcgcctggttgatgagcgtggaaaactgctcgccgtattcgattatggcggtg
acgtttaccaacaaagcggcggcggagatgcgtcatcgtatcgggcaactgatgggcact
agccagggcggtatgtgggtcggcaccttccacgggctggcgcaccgcctgctgcgtgcg
caccatatggacgccaacctgccgcaggatttccagatcctcgacagtgaagaccagcta
cgtctgcttaagcgtttgatcaaggcgatgaatctcgacgagaagcagtggccgccgcgt
caggcaatgtggtacatcaacagccagaaagatgaggggctgcgtccgcatcatattcag
agctacggcaacccagtggagcaaacctggcagaaggtgtatcaggcgtatcaggaagcc
tgtgaccgcgcgggtctggttgattttgctgaattgctgcttcgtgcccacgaattatgg
ctcaacaaaccgcatatccttcaacattaccgcgaacgtttcaccaatatcctggtggat
gaattccaggacactaacaacattcagtacgcgtggatccgactgctggcaggcgatact
ggcaaagtgatgatcgttggcgatgacgaccagtcaatctacggctggcgcggggcgcag
gtcgagaatattcagcgtttcctcaatgatttccccggtgctgaaactatccgtctggag
cagaactaccgctctaccagcaatattctgagcgccgctaacgccctgattgaaaacaat
aacgggcgtctgggtaaaaaactgtggaccgatggcgcggacggtgagcctatttccctc
tattgcgcttttaacgaactcgacgaagcgcgttttgtggttaaccgcatcaaaacctgg
caggacaacggcggggcgctcgctgagtgcgccattctctaccgcagcaacgcccagtcg
cgtgtgctggaagaggcgttattgcaggcgagtatgccgtatcgtatttacggcgggatg
cgcttcttcgaacgccaggaaatcaaagatgcgctctcgtatctgcgcctgattgccaac
cgcaacgacgacgcagcctttgagcgtgtggtgaatacgccaacgcggggtattggtgac
cggacgctggacgtggtacgtcagacatcgcgagatcgccagttaacactctggcaggca
tgtcgtgaactgttgcaggaaaaagccctcgccggacgtgctgccagcgccttacagcgg
tttatggagctgatcgacgccttagcgcaggaaactgccgatatgccgctgcatgtacag
actgaccgggtaattaaagactccggcctgcgcaccatgtacgagcaggagaagggcgaa
aaaggtcagacgcgtatcgaaaacttagaggaactggtgacggcaacgcgccagttcagc
tacaacgaagaagacgaagatttaatgccgctgcaggcattcctctcccatgcggcgctg
gaagcgggcgaggggcaggcggatacctggcaggacgcggtgcagttgatgacgctacac
tcggcgaaaggtctggaattcccgcaggtgtttatcgttggtatggaagagggcatgttc
ccaagccagatgtcgctggatgaaggcgggcgtctggaagaagaacgccgtctagcctac
gttggcgtaacccgcgcgatgcagaaactgacgctgacctacgcggaaacccgccgtcta
tatggcaaagaggtttaccatcgcccgtcgcgctttatcggtgagttgccggaagagtgt
gtggaagaggtgcgcctgcgcgccacggtaagacgcccggtcagccatcaacggatgggg
acgccgatggtcgagaacgacagcggctacaagctcggccagcgcgtacgccacgctaag
tttggtgaaggcaccatcgtcaatatggaaggcagcggtgagcatagccgtttgcaggtg
gcgttccagggccagggtattaaatggctggtggcggcttacgcccggttggagacggtg
tga
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