KEGG   Escherichia coli O78 H11 K80 H10407 (ETEC): ETEC_1578
Entry
ETEC_1578         CDS       T02069                                 
Name
(GenBank) putative HipB DNA-binding transcriptional regulator
  KO
K15773  HTH-type transcriptional regulator / antitoxin HipB
Organism
elh  Escherichia coli O78:H11:K80 H10407 (ETEC)
Brite
KEGG Orthology (KO) [BR:elh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:elh03000]
    ETEC_1578
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:elh02048]
    ETEC_1578
Transcription factors [BR:elh03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    ETEC_1578
Prokaryotic defense system [BR:elh02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HipA-HipB
    ETEC_1578
SSDB
Motif
Pfam: HTH_3 HTH_19 HTH_37 HTH_31 HTH_26 MarR HTH_23 Terminase_5 YdaS_toxin HTH_25 Sigma70_r4 HTH_24 HTH_Tnp_1 HTH_38 HTH_36 HTH_28 HTH_11 DUF2623
Other DBs
NCBI-ProteinID: CBJ01082
LinkDB
Position
complement(1711140..1711406)
AA seq 88 aa
MMSFQKIYSPTQLANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPDNTTLTTFFKI
LQSLELSMTLCDAKNASPESTEQQNLEW
NT seq 267 nt   +upstreamnt  +downstreamnt
atgatgagctttcagaagatctatagcccaacgcaattggcgaatgcaatgaaactggtt
cgccagcaaaatggctggacgcagagcgagctggcgaaaaaaattggtattaagcaggcg
acgatttccaatttcgaaaacaaccctgacaataccacgctcacgacattttttaagatt
ttacagtcgcttgaactctcaatgacgctatgcgacgcgaaaaatgcctcgccagaatca
acagaacagcaaaatctggagtggtaa

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