KEGG   Escherichia coli O83 H1 NRG 857C (AIEC): NRG857_16930
Entry
NRG857_16930      CDS       T02068                                 
Name
(GenBank) hypothetical protein
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
eln  Escherichia coli O83:H1 NRG 857C (AIEC)
Brite
KEGG Orthology (KO) [BR:eln00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:eln03016]
    NRG857_16930
Enzymes [BR:eln01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     NRG857_16930
Transfer RNA biogenesis [BR:eln03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    NRG857_16930
 Prokaryotic type
   tRNA splicing ligases
    NRG857_16930
SSDB
Motif
Pfam: RtcB DUF4514
Other DBs
NCBI-ProteinID: ADR28795
UniProt: A0A0H3EMS8
LinkDB
Position
complement(3568584..3569810)
AA seq 408 aa
MNYELLTTENAPVKMWTKGVPVEADARQQLINTAKMPFIFKHIAVMPDVHLGKGSTIGSV
IPTKGAIIPAAVGVDIGCGMNALRTALTAVDLPENLAELRQAIETAVPHGRTTGRCKRDK
GAWENPPVNVDAKWAELEAGYQWLTQKYPRFLNTNNYKHLGTLGTGNHFIEICLDESDQV
WIMLHSGSRGIGNAIGTYFIDLAQKEMQETLETLPSRDLAYFMEGTEYFDDYLKAVAWAQ
LFASLNRDAMMENVVTALQSVTQKTVKQPQTLAMEEINCHHNYVQKEQHFGEEIYVTRKG
AVSARAGQYGIIPGSMGAKSFIVRGLGNEESFCSCSHGAGRVMSRTKAKKLFSVEDQIRA
TAHVECRKDAEVIDEIPMAYKDIDAVMAAQSDLVEVIYTLRQVVCVKG
NT seq 1227 nt   +upstreamnt  +downstreamnt
atgaattacgaattactgaccactgaaaatgctccggtaaaaatgtggaccaaaggcgtg
ccggtagaagccgatgcgcgtcagcaacttattaataccgcgaagatgccgtttattttc
aaacatattgcggtaatgcctgatgtacacctgggtaaaggttccaccattggtagcgtg
atcccgaccaaaggggcgattattccggcggcggtgggcgtggatatcggttgtggaatg
aacgcgctgcgtaccgcgttaacggcggtagacctgcctgaaaacctggcggagctgcgt
caggcgattgaaacggccgtgccgcacggacgtaccactggccgttgtaaacgtgataaa
ggcgcatgggaaaatccacctgttaacgtcgatgcgaaatgggctgagctggaagccggt
tatcagtggttaacgcaaaaatatccccgtttccttaacactaacaactataaacacctg
ggaacgctgggaacgggtaaccactttattgaaatctgccttgatgagtcggaccaggtg
tggattatgctgcactccggttcacgcggaatcggtaatgccatcggaacttactttatc
gatctggcgcaaaaagagatgcaggaaacgcttgaaacgttgccatcgcgtgacctggcg
tactttatggaaggtacggaatactttgatgattacctgaaagccgtggcctgggcgcag
ctttttgccagccttaaccgcgatgcgatgatggaaaacgtggtaacggcgttgcagagc
gttacgcagaaaacggtaaaacagccacaaacgctggcgatggaagagatcaactgtcac
cacaactatgtgcaaaaagaacagcactttggcgaagagatctatgtgacgcgtaaaggc
gcggtgtctgcgcgtgcgggtcaatatggaattattcccggttcgatgggggcgaaaagc
tttatcgtccgtgggctgggaaatgaagagtcgttctgttcgtgcagccacggtgccggg
cgggtaatgagccgtactaaagcgaaaaaactgttcagtgtggaagatcaaatccgtgcc
accgcgcatgtggagtgccgtaaagatgccgaggtgatcgacgaaatcccgatggcgtat
aaagatattgatgcggtgatggcggcacaaagcgatctggtggaagttatctataccctg
cgtcaggtggtgtgcgtaaaaggataa

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