Escherichia coli O83 H1 NRG 857C (AIEC): NRG857_16930
Help
Entry
NRG857_16930 CDS
T02068
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
eln
Escherichia coli O83:H1 NRG 857C (AIEC)
Brite
KEGG Orthology (KO) [BR:
eln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eln03016
]
NRG857_16930
Enzymes [BR:
eln01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
NRG857_16930
Transfer RNA biogenesis [BR:
eln03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
NRG857_16930
Prokaryotic type
tRNA splicing ligases
NRG857_16930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
ADR28795
UniProt:
A0A0H3EMS8
LinkDB
All DBs
Position
complement(3568584..3569810)
Genome browser
AA seq
408 aa
AA seq
DB search
MNYELLTTENAPVKMWTKGVPVEADARQQLINTAKMPFIFKHIAVMPDVHLGKGSTIGSV
IPTKGAIIPAAVGVDIGCGMNALRTALTAVDLPENLAELRQAIETAVPHGRTTGRCKRDK
GAWENPPVNVDAKWAELEAGYQWLTQKYPRFLNTNNYKHLGTLGTGNHFIEICLDESDQV
WIMLHSGSRGIGNAIGTYFIDLAQKEMQETLETLPSRDLAYFMEGTEYFDDYLKAVAWAQ
LFASLNRDAMMENVVTALQSVTQKTVKQPQTLAMEEINCHHNYVQKEQHFGEEIYVTRKG
AVSARAGQYGIIPGSMGAKSFIVRGLGNEESFCSCSHGAGRVMSRTKAKKLFSVEDQIRA
TAHVECRKDAEVIDEIPMAYKDIDAVMAAQSDLVEVIYTLRQVVCVKG
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaattacgaattactgaccactgaaaatgctccggtaaaaatgtggaccaaaggcgtg
ccggtagaagccgatgcgcgtcagcaacttattaataccgcgaagatgccgtttattttc
aaacatattgcggtaatgcctgatgtacacctgggtaaaggttccaccattggtagcgtg
atcccgaccaaaggggcgattattccggcggcggtgggcgtggatatcggttgtggaatg
aacgcgctgcgtaccgcgttaacggcggtagacctgcctgaaaacctggcggagctgcgt
caggcgattgaaacggccgtgccgcacggacgtaccactggccgttgtaaacgtgataaa
ggcgcatgggaaaatccacctgttaacgtcgatgcgaaatgggctgagctggaagccggt
tatcagtggttaacgcaaaaatatccccgtttccttaacactaacaactataaacacctg
ggaacgctgggaacgggtaaccactttattgaaatctgccttgatgagtcggaccaggtg
tggattatgctgcactccggttcacgcggaatcggtaatgccatcggaacttactttatc
gatctggcgcaaaaagagatgcaggaaacgcttgaaacgttgccatcgcgtgacctggcg
tactttatggaaggtacggaatactttgatgattacctgaaagccgtggcctgggcgcag
ctttttgccagccttaaccgcgatgcgatgatggaaaacgtggtaacggcgttgcagagc
gttacgcagaaaacggtaaaacagccacaaacgctggcgatggaagagatcaactgtcac
cacaactatgtgcaaaaagaacagcactttggcgaagagatctatgtgacgcgtaaaggc
gcggtgtctgcgcgtgcgggtcaatatggaattattcccggttcgatgggggcgaaaagc
tttatcgtccgtgggctgggaaatgaagagtcgttctgttcgtgcagccacggtgccggg
cgggtaatgagccgtactaaagcgaaaaaactgttcagtgtggaagatcaaatccgtgcc
accgcgcatgtggagtgccgtaaagatgccgaggtgatcgacgaaatcccgatggcgtat
aaagatattgatgcggtgatggcggcacaaagcgatctggtggaagttatctataccctg
cgtcaggtggtgtgcgtaaaaggataa
DBGET
integrated database retrieval system