Escherichia coli O55 H7 RM12579 (EPEC): ECO55CA74_16505
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Entry
ECO55CA74_16505 CDS
T02066
Name
(GenBank) DNA-binding transcriptional activator GcvA
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
elr
Escherichia coli O55:H7 RM12579 (EPEC)
Pathway
elr02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
elr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
ECO55CA74_16505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
elr03000
]
ECO55CA74_16505
Transcription factors [BR:
elr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
ECO55CA74_16505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AEZ41866
LinkDB
All DBs
Position
complement(3416189..3417106)
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AA seq
305 aa
AA seq
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MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSL
LLTEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLLPSFAIHWLVPRLSSFNSAY
PGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKLYAEYLLPVCSPLLLTGEKPL
KTPEDLAKHTLLHDASRRDWQTYTRQLGLNHINVQQGPIFSHSAMVLQAAIHGQGVALAN
NVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWILAKAAAEQEKFR
FRYEQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgattaccaccgctaaatgccttacgagtttttgatgccgcagcacgccat
ttaagtttcactcgcgcagcagaagagctttttgtgacccaggccgcagtaagtcatcaa
atcaagtctcttgaggattttttggggctaaaactgttccgccgccgtaatcgttcactc
ctgctgaccgaggaagggcaaagctatttcctcgatatcaaagagatattttcgcaatta
accgaagcgacgcgtaaactccaggcccgtagcgccaagggggcgttgacggtcagttta
ctccccagtttcgccattcattggttggttccgcgactttccagctttaattcagcttat
ccgggaattgacgttcgaatccaggcggttgatcgtcaggaagataagctggcggatgat
gttgatgtggcgatattttatggtcggggcaactggccggggctacgggtggaaaaactg
tacgccgaatatttattgccggtgtgttcgccgctactgctgactggcgaaaaacccttg
aagaccccggaagatctggctaaacatacgttattacatgatgcgtcacgccgtgactgg
cagacatatactcgtcaattggggttaaatcatatcaacgttcagcaagggccaattttt
agccatagcgccatggtgctgcaagcggctattcacgggcagggagtggcgctggcaaat
aacgtgatggcgcaatctgaaattgaagccggacgtcttgtttgcccgtttaatgatgtt
ctggtcagtaaaaacgctttttatctggtttgtcatgacagccaggcagaactgggtaaa
atagccgcctttcgccaatggatcctggcgaaagccgctgctgaacaagaaaaattccgc
tttcgttatgaacaataa
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