Esox lucius (northern pike): 105031067
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Entry
105031067 CDS
T04894
Symbol
ercc4
Name
(RefSeq) DNA repair endonuclease XPF isoform X1
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
els
Esox lucius (northern pike)
Pathway
els03420
Nucleotide excision repair
els03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
105031067 (ercc4)
03460 Fanconi anemia pathway
105031067 (ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
els03032
]
105031067 (ercc4)
03400 DNA repair and recombination proteins [BR:
els03400
]
105031067 (ercc4)
DNA replication proteins [BR:
els03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
105031067 (ercc4)
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
105031067 (ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
105031067
NCBI-ProteinID:
XP_010903577
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All DBs
Position
LG05:17856946..17869424
Genome browser
AA seq
892 aa
AA seq
DB search
MAGPLLEFETEMFLSLFGTDGLLVTAEGMGIDRILLQFMRVYSEEGSLVLLLNTTTPEQE
YFTEQLRAEGVSHLPKTVTSDVQNTDRYTVYTQGGVLFVTSRILVVDFLTDRIPAHLISG
LLVYRAHKIIDSCQEAFILRLFRQKNKTGFIKAFTDKATSFSSGFCQVERVMRNLFVKKL
FLWPRFQVSVNSVLERHKPEVVELHVSLTPAMRAIQSSILDIMNACLKELKRYNPTLEAE
DLSLENTLGNAFEKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLLYLTQYDCVTFLNLL
DSLHSSQKNFGSNSGWLFLDSSTSLFVNARSRVYHVPQSKKKLKVGADTEKQPSTAGMKR
VLVLEKNPKWEALTEVLQEIEKENMSSELEPGRVLICASDDRTCAQLHEYIHRGSDYILN
RLYARTIGKRDASFDPDAQKHQIQGGSRKQQPEKGTKGKKAKQNSKSKKRPSLTLTQMVG
NGEEDRGGELGSSGGEGGLLGEEEEEEDEAKLKLDLSSDAYYGVLKEPLTVIHPLRGFTD
PYSLTRVLHEVEPSFVVLYDAELSFVRQLEVYKATRPGKPLRVYFLIYGSSTEEQRYLTS
LAKEKQAFEHLIREKATMVVPEEREGREDTNQDLSRNQEAANATTNTRKAGGQEQPKEPS
RVIVDMREFRSELPSLLHRRGLDIEPVTLEVGDYILTADTCVERKSVSDLIGSLQSGRLY
TQCLSMTRYYRRPVLLIEFDPAKPFSLVALGDLRREISANDVTSKLTLLTLHFPRLRILW
CPSPHVTAELFQELKKGGAEPDAAVAQAVTAESDTVAESADLYNPGPYDFLLRMPGVNAK
NYRALIKHADCLADIAKLNQERLAQILGHAGNGKLLYEFLHNTVDVPTQKSK
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcctttacttgagtttgagacagagatgttcctgagtttattcggcactgac
gggctgctggtgacggcggagggaatggggattgaccgcatcctgctacagttcatgcgg
gtatactccgaggaggggagcctggtgctgctgcttaatacaaccaccccggagcaggag
tactttacagagcaactgagggctgagggagtgagccacctgccaaagacagtaaccagt
gatgtccagaacacagatcgctacacagtgtacacacagggaggagttttgtttgtcacc
agccgtatcctagtggtggacttcctcaccgacagaataccagcacatctcatctctggt
ttgctggtgtaccgggcccataagatcattgactcttgccaggaggccttcatcttgagg
ctgttcagacagaagaataagactggttttatcaaggccttcacggacaaggccacatcc
ttctcctctggcttttgtcaggtggagagagtcatgaggaacctctttgtcaagaaactc
ttcctctggccccggttccaggtgtcggtgaactctgtgttggaaagacacaagccagag
gtggtggagctgcacgtgtctctgaccccggccatgagggccatccagagttctatcctg
gatatcatgaacgcatgtctgaaagagctgaaacgttataaccccacactggaggcagag
gacctctcccttgagaacaccctggggaatgcctttgagaagaccatccgtcactacctg
gaccccctgtggcaccagctgggagccaagaccaagtccctggtccaggacctgaagatt
ttgcgaaccctgctgctctaccttacccagtatgactgtgtcactttcctgaacctcctt
gattcactacactccagccaaaaaaactttgggagcaactctgggtggttgttcctggac
tcgagcacctcattgtttgttaacgcccggagccgtgtgtaccatgttcctcagtccaag
aagaagctgaaggtgggagctgacactgagaaacaaccgagcactgctgggatgaagagg
gtgctggtgctagagaagaacccaaagtgggaggcactgacagaggtgctgcaggagata
gagaaggagaacatgagctctgaactggaaccaggccgtgtgttgatctgtgccagtgat
gacaggacctgtgctcaacttcatgagtacattcatcgcggctcagactacatactgaac
cgactctatgctcgcacgatcggcaaaagagatgcctcattcgacccagacgcacaaaaa
catcagatccagggcgggtccaggaaacaacagcctgagaaaggaaccaagggcaagaaa
gccaaacagaactcaaagagtaagaagaggccctctctgaccctgacccagatggtgggt
aacggagaggaggatcgagggggagagctgggcagcagtgggggggagggaggcctgttg
ggagaagaagaggaggaggaggacgaagcgaagctgaagttagacttgtcgtctgatgcc
tactacggtgttctgaaggagccattgaccgttattcatcctcttaggggtttcactgac
ccttacagtctgacgcgggtactgcacgaagtggagcccagctttgtggtgctttatgat
gctgaactcagctttgttcgtcaactggaggtttacaaagccaccagaccgggaaaacca
ctgagggtgtacttcctgatttatggcagctccacagaggagcagagatacctgacgagt
ctggctaaagagaaacaggctttcgaacacctcataagggaaaaagccaccatggtcgtt
cctgaggaaagagagggaagagaagacactaaccaggatctcagcaggaatcaggaggct
gctaacgctaccaccaacacccgcaaggcagggggccaggagcagcccaaggagccgtcc
cgtgtgatcgtggacatgcgagagttccgcagcgagctcccctctctcctccaccggcgc
ggcctggacatcgagcccgtgaccctggaggtgggcgactacattctgacggccgacacc
tgtgtggagcgcaagagcgtcagtgacctgattggctcgctgcagagcggacggctctac
acccagtgtctctccatgacccgatactaccgcaggcccgtcctgctaatcgagttcgac
cccgccaagcccttctccctggtggcgctcggcgacctccgccgggagatctcagccaat
gacgtcacctccaagctgaccctcctcaccctgcacttccctcgcctcaggattctgtgg
tgtccctccccccacgtcacggcagaactgttccaggagctgaagaaaggcggagcagag
ccagacgccgctgtcgcccaggccgtcacagccgagtcagacacagtggcagagtctgct
gacctctacaaccccgggccatatgacttcctgcttcggatgccaggtgtcaatgctaag
aactacagggctctgattaaacacgcggattgcctggcagacatagcgaaactaaaccag
gagaggctagctcagattttgggacatgctggcaatgggaagttgctctatgagtttttg
cataacactgttgatgtccctacacagaaaagtaagtag
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