Elizabethkingia meningoseptica: BBD33_10235
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Entry
BBD33_10235 CDS
T04744
Name
(GenBank) helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
emg
Elizabethkingia meningoseptica
Brite
KEGG Orthology (KO) [BR:
emg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
emg03009
]
BBD33_10235
Enzymes [BR:
emg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BBD33_10235
Ribosome biogenesis [BR:
emg03009
]
Prokaryotic type
rRNA helicases
BBD33_10235
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
P-loop_SecA
Flavi_DEAD
Helicase_C_2
PhoH
Motif
Other DBs
NCBI-ProteinID:
AQX05601
LinkDB
All DBs
Position
complement(2231525..2232832)
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AA seq
435 aa
AA seq
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MNLESIYKKLQIQDMNQMQKSTYKATENNQDIVLLSPTGSGKTLAFLLPVLRNLKKNTSG
IQALVLVPARELALQIEQVFKAMKTDYKVTVCYGGHDKKTEVNNLIDAPALLIGTPGRVA
DHLRNNNFDPSTITTLILDEFDKSLEFGFQEEMSFIIGSMKNLSQRILTSATAMEEIPEF
TGLKNEKTIDFLKLSDIKPDIQFKKVITTAEEKLDALFQLICKIGNKRTLIFCNHRDAVD
RISELLKDKGIERETFHGGMDQDERERALLKFRNDSAKILITTDLAARGLDIPEVESIVH
YQLPPKEDAFIHRNGRTARMNSKGFAYLIMKEDDHFPFLKNDIPEETLTENNKIPQRTSF
QTIYISVGKKDKVNKVDIVGYFIKKGELDKNDIGLIEVKDTSCYVAVSRNKIPALLKKLA
TEKLKGKKVKMEVAY
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagaatcgatttataaaaaattgcagattcaggatatgaatcagatgcaaaaa
tccacatataaagctacagaaaacaatcaggatattgtactactttctcctacaggttcc
ggaaaaacattggcttttttacttcctgtacttagaaaccttaaaaagaatacatccggt
attcaggctttagtattagttcctgcaagggagctggctttacagatagagcaggttttt
aaagcgatgaaaaccgattacaaggtaactgtatgttatggcggccacgataagaaaaca
gaagtaaataacttaatagatgcacctgctttattaataggaacaccgggaagagttgca
gatcatctccggaataataatttcgatccttcaacgattaccactttgatattagatgag
tttgacaaatcactggaatttggatttcaggaagaaatgagctttattatcggctccatg
aaaaacttatcacaaagaattctgacttctgctacggcaatggaagaaattcctgaattc
accggattaaaaaatgaaaaaacaatcgacttcttaaagctaagtgatataaaaccggat
attcagtttaaaaaggtgattactaccgcggaagaaaaactagatgctctattccaacta
atatgtaaaataggcaataaaagaaccttaattttctgtaatcacagagatgctgtcgac
agaatttcagaactgttaaaagacaagggtatcgaaagagaaaccttccacggtggaatg
gatcaggatgaaagagagcgggccctcttaaaattcagaaatgattctgcaaaaattctt
attacgactgatttagcagcacgcggactcgatattcccgaagtagaatctattgtacat
taccagcttcctcccaaagaagatgctttcattcacagaaacggacgtaccgcaagaatg
aattccaaaggttttgcttatctgattatgaaagaggatgaccattttccgtttcttaaa
aatgacatacctgaggaaaccctgactgaaaataataaaattccgcaacgaacctctttt
caaacgatctacattagtgtgggtaaaaaagataaggtaaacaaggtagatattgttggt
tattttattaaaaaaggagaactggataagaatgatattggtctgattgaagtaaaagac
acttcatgttatgttgccgtttccagaaacaaaataccagctttattaaaaaagctggct
actgaaaaactaaaaggtaaaaaagttaaaatggaagttgcttattaa
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