Enterobacter cloacae subsp. cloacae ATCC 13047: ECL_04399
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Entry
ECL_04399 CDS
T01231
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
enc
Enterobacter cloacae subsp. cloacae ATCC 13047
Pathway
enc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
enc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ECL_04399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
enc03021
]
ECL_04399
Transcription machinery [BR:
enc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ECL_04399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DNA_ligase_A_N
HTH_SUN2
Motif
Other DBs
NCBI-ProteinID:
ADF63928
UniProt:
A0A0H3CPQ3
LinkDB
All DBs
Position
4516864..4518711
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AA seq
615 aa
AA seq
DB search
MEQNPQSQLKLLVQRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DADDLLLAETSNNTDEDAEEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEID
IAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDMAPTA
THVGSELSQEEMDDDEDEDEEESDDDSADDDNSIDPELAREKFAELRTQYEVTRDTIKAK
GRSHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERIIMKLCVEQCKMP
KKNFITLFTGNETSETWFNAAIAMNKPWSEKLHDVKEDVHRGLQKLQQIEEETGLTIEQV
KDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDK
FEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREP
TPEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTE
SLRAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKL
RHPSRSEVLRSFLDD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgcagtcacagctgaaacttcttgtccaacgtggtaaggagcaaggc
tatctgacctatgccgaggtcaatgaccatctgccggaagatatcgtcgattcagatcaa
atcgaagacatcatccaaatgatcaatgacatgggcattcaggtgatggaagaagcaccg
gatgccgatgatctgttgctggctgaaacctccaacaacactgacgaagatgcggaagaa
gctgctgcacaggtactgtccagcgtggaatctgaaatcgggcgtaccactgacccggtc
cgcatgtacatgcgcgaaatgggtaccgttgaactgttgacccgcgaaggcgaaattgac
atcgcaaaacgcatcgaagacgggatcaaccaggttcagtgctctgttgctgagtacccg
gaagcgatcacctatctgctggagcagtacgatcgtgttgaagcggaagaagcgcgtctg
tccgatctgatcaccggttttgtcgacccgaacgctgaagaagatatggcgccaaccgcc
actcacgtcggttctgaactgtctcaggaagagatggatgacgacgaagacgaagatgaa
gaagagagcgacgacgacagcgccgatgatgacaacagcatcgacccggaactggcacgt
gagaagttcgccgaactgcgtacccagtacgaagtgacgcgtgacaccatcaaagccaaa
ggtcgcagtcacgctgctgcccaggaagagatcctgaaactgtctgaagtcttcaaacag
ttccgcctggtgccaaaacagttcgactacctggtgaacagcatgcgcgtgatgatggat
cgcgtacgtacccaggaacgcatcatcatgaagctgtgcgttgagcagtgcaaaatgccg
aagaagaacttcatcaccctcttcaccggcaacgaaaccagcgaaacctggttcaacgcg
gctatcgcaatgaacaagccatggtctgaaaaactgcacgacgtgaaagaagacgtgcat
cgcggtctgcagaagctgcagcagattgaagaagagaccggcctgaccatcgagcaggtc
aaagacatcaaccgtcgtatgtccatcggtgaagcgaaagcccgccgtgcgaagaaagag
atggttgaagcaaacttacgtctggttatctctatcgccaagaaatacaccaaccgcggt
ctgcagttcctggatctgattcaggaaggcaacatcggtctgatgaaagcggtagataag
tttgaataccgtcgtggttacaagttctccacctatgcgacctggtggatccgtcaggca
attacccgctctatcgcggatcaggcgcgcaccatccgtattccggtgcatatgattgag
accatcaacaagctcaaccgtatttcccgccagatgctgcaggagatgggtcgcgagccg
acgccggaagagctggctgaacgcatgctgatgccggaagacaagatccgtaaagtgctg
aagatcgccaaagagccaatctccatggaaacaccaatcggtgatgatgaagattcgcat
ctgggtgatttcatcgaggataccaccctcgagctgccgctggactctgccaccaccgag
agcctgcgtgctgccacgcacgacgttctggctggcctgaccgcccgtgaagcgaaagta
ctgcgtatgcgtttcggtatcgatatgaacaccgaccacacgctggaagaagtgggtaaa
cagtttgacgttacccgcgaacgtatccgtcagatcgaagcgaaggcgctgcgtaaactg
cgccatccgagccgctctgaagtgctgcgtagcttcctggacgattaa
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