Enterobacter sp. FY-07: AKI40_4782
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Entry
AKI40_4782 CDS
T04405
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
enf
Enterobacter sp. FY-07
Pathway
enf03420
Nucleotide excision repair
enf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
enf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AKI40_4782
03430 Mismatch repair
AKI40_4782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enf03400
]
AKI40_4782
Enzymes [BR:
enf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AKI40_4782
DNA repair and recombination proteins [BR:
enf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AKI40_4782
MMR (mismatch excision repair)
Other MMR factors
AKI40_4782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
DUF6658
Motif
Other DBs
NCBI-ProteinID:
AMO51155
LinkDB
All DBs
Position
complement(4904661..4906829)
Genome browser
AA seq
722 aa
AA seq
DB search
MPMDVSYLLDSLNDKQRDAVAATRSNMLVLAGAGSGKTRVLVHRIAWLMTVENCSPYSIM
AVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSED
QLRLLKRLIKAMNLDEKQWPPRQAMWYINGQKDEGIRPHHIQSFGNPVEQTWQKVYQAYQ
EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG
DTGKVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTSNILSAANALIE
NNNGRLGKKLWTDGVDGEPISLYCAFNELDEARFVVNRIKTWQDNGGALEKCAILYRSNA
QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI
GDRTLDVVRQTSRDRQLTLWQATRELLQEKALAGRAASALQRFLELIDALAQETADLPLH
VQTDRVVKDSGLRMMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA
ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL
AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRASISRPVSHQR
MGTPVAQSDTGYKLGQRVRHAKFGEGTVVNMEGSGEHSRLQVAFQGQGIKWLVAAYAKLE
AV
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
gtgcccatggacgtttcttatctgctcgacagcctcaatgacaaacaacgcgacgccgta
gccgcgacgcgcagcaatatgctggtgctggcgggcgcagggagcggtaagacgcgtgtg
ctggtacaccgtatcgcctggttgatgaccgtagaaaattgctcgccgtattcgattatg
gcggtcacgtttaccaacaaagcggcagcggaaatgcgccaccgtatcggtcaactgatg
ggcacctctcagggtggaatgtgggttggcacattccacgggctggcgcaccgcctgttg
cgcgcgcaccatatggacgccaatctgccgcaggactttcagatcctcgatagcgaagac
cagctcaggttgcttaagcgtctgattaaggctatgaaccttgatgagaagcagtggccg
ccgcggcaggccatgtggtacatcaacgggcagaaagatgaaggcatccgcccgcatcat
attcaaagtttcggcaatccggtggagcaaacctggcagaaagtgtaccaggcctaccag
gaagcctgcgatcgcgccgggctggtggattttgccgagctgttactgcgtgcccacgag
ttgtggctgaacaagccacacattttgcagcactatcgcgagcgctttaccaacatcctg
gtggacgaattccaggataccaacaacattcaatatgcgtggatccgtctgctggcgggt
gataccggtaaggtgatgatcgtcggtgatgatgaccagtccatttacggctggcgtggc
gcgcaggtggaaaacatccagcgtttcctgaaagatttccccggtgcggaaaccatccgt
ctggagcaaaactaccgttccaccagcaatatactcagtgcagctaacgccctgattgaa
aataacaatgggcggctggggaaaaaactgtggaccgatggcgttgacggcgagccgatt
tccctctactgcgcgttcaacgagctggatgaagcccggtttgtggttaaccgtatcaaa
acctggcaggacaacggcggggcactggaaaaatgcgccattctctatcgcagtaacgcc
caatcgcgtgttctggaagaggcgctgttgcaggcgagtatgccatatcgcatttatggc
ggtatgcgcttcttcgaacgccaggagatcaaagatgcgctctcctatctgcgcctgatc
gccaaccgtaatgacgatgcggcttttgagcgcgtagtgaataccccaacacgcggtatt
ggcgaccgcacgctggatgtggtgcgccagacctcccgtgaccgtcagttgacgctgtgg
caggcaactcgtgagctgttacaggaaaaagcgctggccgggcgtgctgccagcgccttg
caacgtttcctcgaattgattgatgcactggcacaagagacggcggatctgccactacat
gtgcaaactgaccgcgtggtgaaagactccggtttgcgcatgatgtacgaacaggaaaaa
ggcgagaaaggccagacgcgcatcgagaacttagaggaactggtcacggcaacacgccag
ttcagctacaacgaagaagacgaagatttaatgccgctgcaggcttttctctcccacgcg
gcactggaagcgggcgaagggcaggcggatacctggcaggatgctgtgcaattgatgacg
ctgcattcagcaaaaggtctggagttcccgcaggtgtttatcgttgggatggaagagggt
atgttcccgagccagatgtcgctggatgaaggtgggcgtctggaggaggaacgtcggctt
gcttacgtgggtgtgacccgtgcgatgcaaaagctgactttaacctacgcggaaacccgt
cgtctgtacggcaaagaggtgtaccatcgtccgtcgcgctttattggtgaactgccggaa
gagtgtgtggaagaggtgcgtctgcgcgccagcatcagccgtccggtcagccatcagcgt
atggggacgccggttgcgcagagcgacacgggttacaaactaggccagcgcgtgcgccac
gccaagtttggtgaaggcacggtggtgaacatggaaggcagcggcgagcacagccgtttg
caggtggctttccaggggcagggcattaaatggctggtcgccgcttatgcgaagctcgaa
gccgtgtaa
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