Enterobacter kobei ENHKU01: ECENHK_00650
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Entry
ECENHK_00650 CDS
T02315
Symbol
ligB
Name
(GenBank) NAD-dependent DNA ligase LigB
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
eno
Enterobacter kobei ENHKU01
Pathway
eno03030
DNA replication
eno03410
Base excision repair
eno03420
Nucleotide excision repair
eno03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ECENHK_00650 (ligB)
03410 Base excision repair
ECENHK_00650 (ligB)
03420 Nucleotide excision repair
ECENHK_00650 (ligB)
03430 Mismatch repair
ECENHK_00650 (ligB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eno03032
]
ECENHK_00650 (ligB)
03400 DNA repair and recombination proteins [BR:
eno03400
]
ECENHK_00650 (ligB)
Enzymes [BR:
eno01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ECENHK_00650 (ligB)
DNA replication proteins [BR:
eno03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ECENHK_00650 (ligB)
DNA repair and recombination proteins [BR:
eno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ECENHK_00650 (ligB)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ECENHK_00650 (ligB)
MMR (mismatch excision repair)
DNA ligase
ECENHK_00650 (ligB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ECENHK_00650 (ligB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
DUF3701
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
AFP68027
LinkDB
All DBs
Position
132788..134434
Genome browser
AA seq
548 aa
AA seq
DB search
MLLWCGYGAAVCPVWSQAKAGKEIASLSAQIKRWDEAYWKQGVSEVNDEVYDQLNGRLAQ
WQRCFGHDLSENTLPALTGSVKHPVAHTGVHKAASKEALGQWMRGQKNLWMQPKVDGVAV
TLVYRNGKLTQAISRGNGLKGEDWTARVRLIPSVPKEVSGALANSVLQGELFWMRENHIQ
RQMGGMNARAKVAGAMMRQNDGALLNQTGIFIWAWPDGPKEMKSMLSALSGAGFSMTASY
TLPTRTVDEVEKQRLAWQNTALPFATDGIVVRSAESPSGERWLPGEGNWVMAWKYPPVAQ
VAEVRDIHFSVGRTGKISVVAALEPVQLDDKQVQRVSLGSVGRWQRLDIAPGDQIQVSLA
GQGIPRFDKVIWRGTDRQKPEPPASRFHSLSCFYASPECMEQFFARLTWLSSKQVFNIEG
LGESGWRTLWQAHHFEHLFSWLLLTQAQLQSTPGFSPARGLALWHRFNLVREQPFIHWMM
ALGAPLPQASLKALGDMSWQQMRERSAKAWQALPGTGEERARQIVSWINAPEIDVLVRWL
ARQHINGF
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgctgttgtggtgtggttatggggcggcggtgtgtccggtgtggtcacaggctaaagcc
ggaaaagagattgcatccttaagcgcacagatcaaacgctgggatgaagcctactggaag
cagggcgtcagcgaggtcaacgacgaggtatacgaccagctcaacggacgcttagcccaa
tggcagcgctgttttggccatgatctctcagagaacaccttacctgcgctgacgggaagc
gtaaaacatcctgttgcccatacgggggtgcataaggccgccagcaaagaagcgctaggt
cagtggatgcgaggccagaaaaatctctggatgcagccaaaagtcgacggcgtggcggtg
acgctggtgtatcgcaacggaaagctcacccaggctatcagtcgtggtaatgggttaaaa
ggtgaggactggaccgctcgcgtgcgtttgattccgtcagtgcctaaagaggtatccggc
gcgctggcaaacagcgtcctgcagggggagcttttctggatgcgcgagaatcacattcag
cggcagatgggcggaatgaatgcacgcgcaaaagtggcgggagcgatgatgcggcagaac
gacggtgcgcttctgaaccagacaggaatatttatctgggcctggccggatggtccgaaa
gagatgaaaagtatgctttctgcgctgtccggagcagggttttccatgacggcgtcctat
accttgcccacccgaacggttgatgaagttgaaaagcagcgtttggcctggcaaaacaca
gcattaccctttgccacggatggcattgtggttcggtccgcggagtcgccttcaggggag
cgctggctgcctggcgaaggcaactgggtcatggcgtggaaatatccgccagttgcgcag
gttgctgaggtcagggatattcatttttcagttgggcgtacgggtaaaatttccgtcgtg
gcggcgctggagccggtgcaactggatgataaacaggtacagcgggtgagcctggggtcg
gttggacgctggcagaggctggatattgcccctggcgatcagatccaggtgagccttgcc
gggcagggtatcccacggtttgataaggttatctggcgagggacggacagacaaaaacct
gaaccaccggcctcgcgttttcactccctgagctgtttttatgcttcgccagagtgtatg
gaacagttcttcgcccggttgacatggctcagttctaagcaggtattcaacattgaagga
ttaggcgagtcaggctggcgaacactctggcaggcgcatcattttgaacatctcttctca
tggctgctcttaacgcaggcgcagctccagtctacgccggggttttctccagcgcgtggg
ctggcgctctggcatcgcttcaacctggtacgtgaacaaccttttatccactggatgatg
gcgttgggtgcgccattgccacaagcctcgctgaaggcgttgggggatatgtcatggcaa
cagatgcgtgaacgcagcgcaaaggcttggcaggccttgccgggtacgggggaagagagg
gcgcggcagatcgtgagctggataaatgcaccagagattgatgtgctggtccggtggctt
gcccggcagcacatcaacggtttctga
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integrated database retrieval system
