Escherichia coli O7 K1 CE10: CE10_1194
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Entry
CE10_1194 CDS
T01999
Symbol
ycfS
Name
(GenBank) L,D-transpeptidase linking Lpp to murein
KO
K19236
L,D-transpeptidase YcfS
Organism
eoc
Escherichia coli O7:K1 CE10
Pathway
eoc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
eoc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
CE10_1194 (ycfS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
eoc01002
]
CE10_1194 (ycfS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
eoc01011
]
CE10_1194 (ycfS)
Peptidases and inhibitors [BR:
eoc01002
]
Cysteine peptidases
Family C82
CE10_1194 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:
eoc01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
CE10_1194 (ycfS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
AEQ12014
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All DBs
Position
complement(1241284..1242243)
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AA seq
319 aa
AA seq
DB search
MIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPAGSRLVGENKFYVVENDGGSLEAIAK
KYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPGKN
SVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGPD
NPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVIPGTKVNII
NTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKDAAQTDAEVMQHVMD
VRSGMPVDVRRHQVSPQTL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaacgcgtttttctcgctggctaacgttttttacgttcgccgctgccgtggcg
ctggcgctaccggcaaaagccaacacctggccgctgccgccagcgggcagtcgtctggtt
ggcgaaaacaaattttatgtggtggaaaatgacggtggttctctggaagccatcgccaaa
aaatataatgtcggctttctcgcgctgttacaggctaaccccggcgttgatccttacgta
ccgcgcgcgggtagcgtgttaacgatcccgttgcaaaccctacttccagatgcgccgcgc
gaaggcattgtgatcaatattgcggaactgcgtctctattactacccgccgggtaaaaat
tcggtaaccgtgtatcccatcggcattggtcagttgggtggtgacacgctgacgccgaca
atggtgaccaccgtttcagacaaacgtgcaaacccaacctggacgccaacggcaaacatc
cgcgcccgttataaagcacagggaattgagttgcctgcggtagtgccggctggaccggat
aatccaatgggccatcatgcgattcgtctggcggcctatggcggcgtttatttgcttcat
ggtacgaacgccgatttcggcattggcatgcgggtaagttctggctgtattcgtctgcgg
gatgacgatatcaaaacactctttagccaggtcatcccaggtaccaaagtaaatatcatc
aacaccccgattaaagtctctgccgaaccaaacggtgcgcgtctggttgaagtacatcag
ccgctgtcagagaagattgatgacgatccgcagctgctgccaattacgctgaatagcgca
atgcaatcgtttaaagatgcagcacaaactgacgctgaagtgatgcaacatgtgatggat
gtccgttccgggatgccggtggatgtccgccgtcatcaagtgagcccacaaactctgtaa
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